PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016437903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 136aa MW: 16229.3 Da PI: 10.2177 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.4 | 7.4e-09 | 5 | 53 | 15 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ XP_016437903.1 5 QFAQRSRVRKLQYIAELERNVQVLQAESSEVSAELEFLNQQNLILNMEN 53 559*************************************999888887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14703 | 8.68E-12 | 1 | 46 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.8E-8 | 1 | 50 | No hit | No description |
PROSITE profile | PS50217 | 8.737 | 1 | 56 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.11E-7 | 2 | 49 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MKHRQFAQRS RVRKLQYIAE LERNVQVLQA ESSEVSAELE FLNQQNLILN MENKALKQRL 60 ENLAQEQLIK YLEHEVLERE RGRLRALYQQ QQQQQPQQLS SSHRRNTSRD LDQQFANLSL 120 RQKEANRDPV SGQLHI |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269|PubMed:17719007, ECO:0000269|PubMed:19449183}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT013319 | 2e-47 | BT013319.1 Lycopersicon esculentum clone 135006R, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016437903.1 | 2e-90 | PREDICTED: basic leucine zipper 34-like | ||||
Swissprot | F4IN23 | 5e-23 | BZP34_ARATH; Basic leucine zipper 34 | ||||
TrEMBL | A0A1S3XDQ3 | 5e-89 | A0A1S3XDQ3_TOBAC; basic leucine zipper 34-like | ||||
STRING | XP_009602803.1 | 9e-85 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2765 | 17 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 3e-51 | bZIP family protein |
Publications ? help Back to Top | |||
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