PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016434306.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 217aa    MW: 23641.3 Da    PI: 4.4728
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016434306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.8e-163280255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+r ++ +g+Wv+eIr+p++   ++r++lg+f t+e+Aa+a++ a+++l+g
  XP_016434306.1 32 LYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPTPEMAAAAYDVAALALKG 80
                    69***9.55.6*********843...5************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.3E-103180IPR001471AP2/ERF domain
CDDcd000186.26E-153189No hitNo description
SMARTSM003802.2E-263295IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-163290IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-243289IPR001471AP2/ERF domain
PROSITE profilePS5103219.9023289IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MADLSHTTKS SQLSNTVVEN KQSARTNTKH PLYRGIRCRS GKWVSEIREP RKTTRIWLGT  60
FPTPEMAAAA YDVAALALKG SDNVVLNFPC HVNSYPQLPP SPSPADIQSA AATAAVLMKQ  120
EAGEGTVVAQ QGNDDQLSGS NGVGATFNEG DSVEFPSLEN YNVQIGEKYV DEDDVFYMPN  180
LLVDMAEAMM MSPPRINSST LEDSKGDPSY IESLWSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-122693876Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016434306.11e-162PREDICTED: ethylene-responsive transcription factor ERF027-like
TrEMBLA0A1S3X3A51e-161A0A1S3X3A5_TOBAC; ethylene-responsive transcription factor ERF027-like
STRINGXP_009621025.11e-158(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-38ERF family protein