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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016433149.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 542aa MW: 60169.1 Da PI: 5.3558 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016433149.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 326.9 | 4e-100 | 182 | 541 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
v+ L+++ e+++++ ++la+ +Larl+++ +s +g+p+qR+a+yf+eAL+a+la+ ++ +++++s+++++++++++k+fs++sPi+ fs
XP_016433149.1 182 VDELIRFTECFETNAFQLAHVILARLNQRlRSAAGKPLQRAAFYFKEALQAQLAG------STRQTRPASSSDVIQTIKSYKIFSNISPIPMFSS 270
6789************************999************************......778888999999********************** PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
+taNqa+leav+g+ vH+iDfdi+ G++W++++++La+++ +++p lRiT+++++e + e + ++e+L++fA+el++ fe+++++ +++
XP_016433149.1 271 FTANQAVLEAVDGSMLVHVIDFDIGLGGHWASFMKELADKAecrkANAPVLRITALVPEE--YAVESRLIRENLTQFARELNIGFEIDFVLIRTF 363
**************************************877666689***********66..99999**************************** PP
GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsl.eaklpre 278
e l+++++++ gE++aV l+ +++r s +++ ++++sP++vv+v++e + ++++sF + +++ le+ys+l++sl +a+++
XP_016433149.1 364 ELLSFKAIKFMDGEKTAVLLSPAIFRRI------GS---GFVNDLRRISPNMVVHVDSEglMGYGTASFRQTVIDGLEFYSTLLESLeAANIGGG 449
**************************98......44...8*******************87788***********************88999999 PP
GRAS 279 s..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
+ ++++k+E+++l ++iv++va+ g++ ++W++++ +aGF+pv ls++a qa++ll +v+++g++v +++++++l+W+dr+Lv++S
XP_016433149.1 450 NcgDWMRKIENFVLFPKIVEMVAAVGRR------GGGSWKDAMVAAGFRPVGLSQFADFQADCLLGRVQVRGFHVAKRQAEMLLCWHDRALVATS 538
999************************8......99*********************************************************** PP
GRAS 372 aWr 374
aWr
XP_016433149.1 539 AWR 541
**8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 542 aa
Download sequence Send
to blast |
MKVPFSSNDN VSSKPLISNN NNNNLQNATF PAATNGPNLC YEPKSVLELR RSPSPIVEKQ 60 VITNPDFSAL CGGDDPLQLG DHVLSNFEDW DSLMRELGLQ DDSASLSKSN PQLSLTQSES 120 LTQFHNLSEF SADSTQFPTS DFSFSENFPQ QFQSVNQGNY INALDLSGDI HQNNWNVGFD 180 YVDELIRFTE CFETNAFQLA HVILARLNQR LRSAAGKPLQ RAAFYFKEAL QAQLAGSTRQ 240 TRPASSSDVI QTIKSYKIFS NISPIPMFSS FTANQAVLEA VDGSMLVHVI DFDIGLGGHW 300 ASFMKELADK AECRKANAPV LRITALVPEE YAVESRLIRE NLTQFARELN IGFEIDFVLI 360 RTFELLSFKA IKFMDGEKTA VLLSPAIFRR IGSGFVNDLR RISPNMVVHV DSEGLMGYGT 420 ASFRQTVIDG LEFYSTLLES LEAANIGGGN CGDWMRKIEN FVLFPKIVEM VAAVGRRGGG 480 SWKDAMVAAG FRPVGLSQFA DFQADCLLGR VQVRGFHVAK RQAEMLLCWH DRALVATSAW 540 RC
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |