PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016433104.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 358aa    MW: 39505.2 Da    PI: 6.2549
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016433104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.2e-21164214256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_016433104.1 164 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 214
                     59******9.**********965...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.57E-34163223No hitNo description
SMARTSM003805.8E-38164227IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-23164222IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.5E-32164222IPR001471AP2/ERF domain
PROSITE profilePS5103223.235164221IPR001471AP2/ERF domain
PRINTSPR003673.5E-11165176IPR001471AP2/ERF domain
PfamPF008471.8E-14165214IPR001471AP2/ERF domain
PRINTSPR003673.5E-11187203IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MAAAIDIYSN NSSYFSDPLS EELMKALEPF MKGASCSSSV SPSLSPSSSS PSTSSSYFYP  60
FGEPNLYTDF CTIPSLSFNH TGLVAETGSI GLNHLTPSQI FQIQAQIQFQ NQQQQQLLLQ  120
QQQSLGLLPS TPTYSKNLNS MNYLGLKPVP MKQTGGAVQK PTKLYRGVRQ RHWGKWVAEI  180
RLPKNRTRLW LGTFDTAEEA ALAYDKAAYK LRGEFARLNF PHLRHQLNNE LSDFKPLHSS  240
VDAKLQAICQ NLANPKNPTN SDDLSSNNNT VSKPRKSRKA AAKVDSGSVQ DCPENVNVKI  300
EATSSSSPAP SEESSLSVVT SSPESDITFL DFIEPSFDES EDFFLPKYPS VEIDWAAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22163221160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFN6494670.0FN649467.1 Nicotiana benthamiana mRNA for transcription factor DREB2a.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016433104.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like
TrEMBLA0A1S3WZP10.0A0A1S3WZP1_TOBAC; ethylene-responsive transcription factor RAP2-13-like
STRINGXP_009616719.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16102471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.17e-48ERF family protein