PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009804217.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 281aa    MW: 32015.5 Da    PI: 6.4198
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009804217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.5e-11165221561
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                     ++ +r+++NRe+ArrsR RK++ +++L++ +   +  N++L +++   + +++ ++ 
  XP_009804217.1 165 RKRKRMISNRESARRSRMRKQKHLDNLRNQANRHKVANRDLTNRVHLVTSHCQLVQR 221
                     5789***********************************************995554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8161225IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.002163209IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.8E-7164217No hitNo description
SuperFamilySSF579594.9E-10165216No hitNo description
PfamPF001704.4E-8165219IPR004827Basic-leucine zipper domain
CDDcd147021.85E-19166217No hitNo description
PROSITE patternPS000360168183IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MLSTLPAIIL SSDGTFSNQF PSFYDGFFSW DCPESTFIFS EQMVESIFPP NQTPTLESVI  60
FHSGSGSDNS KPDSPNSSFG SDEPNMNNHS PWECLESAFI LPEQRVESVF SPNQSPTPEP  120
VLSNSGSGPD KYITDSPNSS SGSDELNMNN DSPNSGSDIL VINERKRKRM ISNRESARRS  180
RMRKQKHLDN LRNQANRHKV ANRDLTNRVH LVTSHCQLVQ RNNEMLRTES VLLQQRLENI  240
REILLARQLQ QQLYHSSAWP CNNYVEQRPQ IFINQPIINH H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164185RKRKRMISNRESARRSRMRKQK
2177184RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009804217.10.0PREDICTED: G-box-binding factor 1-like
TrEMBLA0A1U7YJF00.0A0A1U7YJF0_NICSY; G-box-binding factor 1-like
STRINGXP_009804217.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.24e-25basic leucine-zipper 6