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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009804066.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 524aa MW: 58178.4 Da PI: 5.0503 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009804066.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 417.4 | 1.2e-127 | 155 | 524 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
+elLl+cAeavs+ + +a+ l++ l++ +s +g+pmqRl ay++e+++arl++s+s +yk+l+++e + se l++++++++++P++kf++
XP_009804066.1 155 KELLLACAEAVSDAYFPAAEVLMNVLEQKVSISGEPMQRLSAYMLEGIRARLFSSGSIIYKKLKCKEPT---NSELLSYMQVLYHICPYYKFAYT 246
689*****************************************************************9...89********************* PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
aN I ea+ +e+ +HiiDf+i qG QW+ L+q+La Rp+gpps+RiTgv++++s + l+ +ge+Lak+Ae+++vpfefn+ +a + +++
XP_009804066.1 247 SANVVIDEAMTNENGIHIIDFQIAQGSQWMFLIQSLARRPGGPPSVRITGVDDSQSAhaRGGGLQLVGEKLAKVAESCRVPFEFNA-AAISGSEV 340
*****************************************************9988889999***********************.8999**** PP
GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
ele+L +++gEalaVn+ + lh+++desvs+ ++rd++L+lvkslsPk+v++veqe+++n++ F rf e+l+yy+a+f+s++a+ pr++++ri+
XP_009804066.1 341 ELENLYIRHGEALAVNFPYILHHMPDESVSTVNHRDRLLRLVKSLSPKIVTLVEQESNTNTAAFIPRFRETLDYYTAMFESIDAGRPRDDKQRIS 435
*********************************************************************************************** PP
GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
E+++++r++vn++acega+r+erhe ++kW++rl++aGF+p pls ++ + ++ +l+ ++s+ yr+ e++g+l+lgWk+r+L ++SaWr
XP_009804066.1 436 AEEHCVARDVVNIIACEGADRVERHELFGKWSMRLKMAGFTPCPLSPSVGEAINDMLKDYSSN-YRIAENKGALYLGWKNRALATTSAWR 524
*************************************************************77.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 524 aa
Download sequence Send
to blast |
MQASQRPMEK VEQYYSPYYV FNNNSNDTSS SGTQFSFQSQ NEQFFTLDSL PAAGYVIYDS 60 PPAVSVSSNW SPFSPQYSQS TISDQHHSSD NTYGSPLSGC SGVDGVLSEM ANKLLGPESD 120 IDDSSSCSFN DVVSEPSSLT KWNRVLEIAS SLDVKELLLA CAEAVSDAYF PAAEVLMNVL 180 EQKVSISGEP MQRLSAYMLE GIRARLFSSG SIIYKKLKCK EPTNSELLSY MQVLYHICPY 240 YKFAYTSANV VIDEAMTNEN GIHIIDFQIA QGSQWMFLIQ SLARRPGGPP SVRITGVDDS 300 QSAHARGGGL QLVGEKLAKV AESCRVPFEF NAAAISGSEV ELENLYIRHG EALAVNFPYI 360 LHHMPDESVS TVNHRDRLLR LVKSLSPKIV TLVEQESNTN TAAFIPRFRE TLDYYTAMFE 420 SIDAGRPRDD KQRISAEEHC VARDVVNIIA CEGADRVERH ELFGKWSMRL KMAGFTPCPL 480 SPSVGEAIND MLKDYSSNYR IAENKGALYL GWKNRALATT SAWR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |