PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009803646.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family SAP
Protein Properties Length: 448aa    MW: 49336.4 Da    PI: 6.6087
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009803646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP714.79.2e-21824485455
             SAP   5 sssssseseegseggeggdassgesegpsssrqr..aanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrlt 97 
                     sss++   + g + ++gg+   g+ +gpsssr+r    n+vwpePfleala+q+aidasrs+Grlaaa+al  +fqvcstwravsrsdllwq+lt
  XP_009803646.1   2 SSSEE--VGGGGDDDNGGGG--GTGGGPSSSRRRrgGGNGVWPEPFLEALASQIAIDASRSIGRLAAAQALSSLFQVCSTWRAVSRSDLLWQNLT 92 
                     23233..3333333333333..3445555555443589********************************************************* PP

             SAP  98 rriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrd 192
                      +iW+r +llr+tW++eyiy+h+t +nfr+r+y y tl+f pa++d++ ++d lsCr+lal+d++laaGf+dG+v+lf+l+tr+h+stf+pq rd
  XP_009803646.1  93 LQIWNRRHLLRQTWHDEYIYWHQTCNNFRQRTYMYHTLHFVPANNDNN-NNDGLSCRRLALADHHLAAGFSDGSVQLFHLQTRVHLSTFHPQLRD 186
                     ******************************************977775.66******************************************** PP

             SAP 193 rlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGslt 287
                     rlGr+sravsGi++ d ++vfa+ldGdihvavi g  a+++rra+lGdvvndGalvdf+G+++WwvGlyaGvpGrafhiW++eteel+fvGG lt
  XP_009803646.1 187 RLGRYSRAVSGIILFDESVVFASLDGDIHVAVIGG--ATPPRRAHLGDVVNDGALVDFTGCDQWWVGLYAGVPGRAFHIWNSETEELIFVGGDLT 279
                     *********************************99..78******************************************************** PP

             SAP 288 dPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrv 382
                     dPeavmGWh+ltelte+vGr+r+t +++av+Ct lrlvv++lrnqg++++e+++++ liv+s+da+n+ +v+vds+Gvatvrrve+leevcrf+v
  XP_009803646.1 280 DPEAVMGWHLLTELTEFVGRIRITTQDMAVSCTGLRLVVINLRNQGLIIQERSFQQVLIVGSFDATNKLLVTVDSQGVATVRRVEDLEEVCRFNV 374
                     *********************************************************************************************** PP

             SAP 383 rg.aqrgvlgCvng.gyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455
                     rg +qrgv+gC+n  gya++y ggv+rvW +++ + ylyslrer+ge na++a++rh+ ++ssdgtihl+dfgaq
  XP_009803646.1 375 RGaSQRGVVGCMNSsGYAVMYVGGVIRVWAVQNGV-YLYSLRERIGEGNAILANERHIVACSSDGTIHLWDFGAQ 448
                     **9**********549****************988.*************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.509.3E-565123No hitNo description
SuperFamilySSF813834.8E-668140IPR001810F-box domain
SuperFamilySSF509788.55E-15147219IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.9E-12154181IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509788.55E-15279444IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.9E-12332445IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS500828.804427448IPR001680WD40 repeat
PROSITE patternPS006780431445IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MSSSEEVGGG GDDDNGGGGG TGGGPSSSRR RRGGGNGVWP EPFLEALASQ IAIDASRSIG  60
RLAAAQALSS LFQVCSTWRA VSRSDLLWQN LTLQIWNRRH LLRQTWHDEY IYWHQTCNNF  120
RQRTYMYHTL HFVPANNDNN NNDGLSCRRL ALADHHLAAG FSDGSVQLFH LQTRVHLSTF  180
HPQLRDRLGR YSRAVSGIIL FDESVVFASL DGDIHVAVIG GATPPRRAHL GDVVNDGALV  240
DFTGCDQWWV GLYAGVPGRA FHIWNSETEE LIFVGGDLTD PEAVMGWHLL TELTEFVGRI  300
RITTQDMAVS CTGLRLVVIN LRNQGLIIQE RSFQQVLIVG SFDATNKLLV TVDSQGVATV  360
RRVEDLEEVC RFNVRGASQR GVVGCMNSSG YAVMYVGGVI RVWAVQNGVY LYSLRERIGE  420
GNAILANERH IVACSSDGTI HLWDFGAQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803646.10.0PREDICTED: transcriptional regulator STERILE APETALA-like
RefseqXP_016484858.10.0PREDICTED: transcriptional regulator STERILE APETALA-like
SwissprotQ9FKH11e-171SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A1S4B7T40.0A0A1S4B7T4_TOBAC; transcriptional regulator STERILE APETALA-like
TrEMBLA0A1U7YNT00.0A0A1U7YNT0_NICSY; transcriptional regulator STERILE APETALA-like
STRINGXP_009803646.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40992345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-157SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]