PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009802037.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 272aa    MW: 29707.8 Da    PI: 5.6302
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009802037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.4e-2977134359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY +eHnh+
  XP_009802037.1  77 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTTLLITYCSEHNHQ 134
                     99************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-3067136IPR003657WRKY domain
PROSITE profilePS5081131.11270136IPR003657WRKY domain
SuperFamilySSF1182907.59E-2671136IPR003657WRKY domain
SMARTSM007741.7E-3575135IPR003657WRKY domain
PfamPF031067.7E-2577134IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MEDRLNRRST PFFIKQEDST GTPPDNAADS PFSGDEAAEV NMPSPRKRRG AKKKVITVPI  60
IDADGSRSKG EVYPPPDSWS WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRLDP  120
TTLLITYCSE HNHQFPAATS KHHHHPPATS TPTTSTTSTN TAGDNNAAAA ATDVTMTDKS  180
SPEECDVFAY QHDNGFSELA GELGWFSDVG TPTFMENTSS MVGSTWNDAD VALMLPIREE  240
DQSLFGDLGE LPECSVVFRR YSVEAPCCGG TG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-2053136679Disease resistance protein RRS1
5w3x_D2e-2053136679Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009802037.10.0PREDICTED: probable WRKY transcription factor 69 isoform X2
RefseqXP_016503555.10.0PREDICTED: probable WRKY transcription factor 69 isoform X2
TrEMBLA0A1S4CR210.0A0A1S4CR21_TOBAC; probable WRKY transcription factor 69 isoform X2
TrEMBLA0A1U7YD480.0A0A1U7YD48_NICSY; probable WRKY transcription factor 69 isoform X2
STRINGXP_009802036.11e-180(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.23e-59WRKY DNA-binding protein 69