PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009800424.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 326aa    MW: 35152.1 Da    PI: 7.8235
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009800424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822211.62e-6521451148
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+vedDGttyrkg+kp ++++++g sas+sp+ss+q
  XP_009800424.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEDDGTTYRKGCKPVHHMDIIGGSASVSPCSSYQ 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                              sp +sy++sp+sss+psp+s+  i + ++    +sl+p+l++ls+ ss
  XP_009800424.1  97 --------LSPGASYNPSPASSSIPSPVSSHYIANVQNnsdpNSLIPWLKNLSSGSS 145
                     ........788888888888888888888877655444567799*******998443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.4E-663141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG  60
WIVEDDGTTY RKGCKPVHHM DIIGGSASVS PCSSYQLSPG ASYNPSPASS SIPSPVSSHY  120
IANVQNNSDP NSLIPWLKNL SSGSSPSSSN FPHHLCIPGD SVSAPVTPPS SSPTARTPRM  180
NDNWENPTAN STWIQHHYPF LPFSTPPSPG GRQTPPDSGW LSGIQTPQDG PSSPTFSLVS  240
NPFGFKEPLS NGGSRMWTPG QSGTCSPAVG AGMDQTADIP MSDVISAEFA FGSNVKGVVK  300
PWEGERIHEE CVSDDLELTL GNSSTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754410.0HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009800423.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_009800424.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-124BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1U7YBC00.0A0A1U7YBC0_NICSY; BES1/BZR1 homolog protein 4-like isoform X1
STRINGXP_009800423.10.0(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.14e-98BES1/BZR1 homolog 4