PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009799422.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 144aa MW: 16728.3 Da PI: 9.6072 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.5 | 1.1e-18 | 5 | 110 | 21 | 128 |
NAM 21 kkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrap 114 k v+gk l++e i+ +d+y+ ePw+L ++++k yf ++ +kk++ + r nr+t +g+W ++ k ke++++ ++ +g k++L + +++ XP_009799422.1 5 KFVAGKCLPTEGLIDFADVYSKEPWQLI--GDSSKKTHYFLTQLKKKKPIDARFNRTTGNGTWTQQNKGKEIFDEdESLIIGYKRSLSYK-NKKD 96 5677788888888999***********7..3446677899999999999*************************8455569*******97.6777 PP NAM 115 kgektdWvmheyrl 128 + + +W+m ey l XP_009799422.1 97 SFLNGRWLMMEYFL 110 779*********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.515 | 1 | 131 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.02E-16 | 5 | 112 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.7E-8 | 27 | 109 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MQLLKFVAGK CLPTEGLIDF ADVYSKEPWQ LIGDSSKKTH YFLTQLKKKK PIDARFNRTT 60 GNGTWTQQNK GKEIFDEDES LIIGYKRSLS YKNKKDSFLN GRWLMMEYFL ADFVLRELKS 120 KEVIWCPSHS NELATLSGFC LQKS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753263 | 1e-149 | EU753263.1 Nicotiana tabacum NAC transcription factor (NAC6) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009799422.1 | 1e-104 | PREDICTED: uncharacterized protein LOC104245505 | ||||
TrEMBL | A0A1U7Y5M2 | 1e-103 | A0A1U7Y5M2_NICSY; uncharacterized protein LOC104245505 | ||||
STRING | XP_009799422.1 | 1e-103 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9815 | 7 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53950.1 | 8e-12 | NAC family protein |