PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009798551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 371aa MW: 41872.2 Da PI: 9.5253 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24 | 8.2e-08 | 244 | 290 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i eLe+ v++L+ae ++ ele l++++ l +e+ XP_009798551.1 244 AQRSRVRKLQYISELERTVQALQAEGSEVSAELEFLNQQSLILSMEN 290 89************************************998888777 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.1E-4 | 233 | 292 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.01E-15 | 235 | 282 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.6E-5 | 244 | 282 | No hit | No description |
SuperFamily | SSF57959 | 8.13E-6 | 244 | 286 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence Send to blast |
MANSKGASSM RNMVYNGKSS LLPPKSPFPS ISPSYVDYVP SSAVTQKGIS KSRDGSHHQR 60 TSSESCLIEE QPFWLDDLLN EPETPVRRGG HRRSSSDSFT YHAAANIAHL DYIAQDDNKF 120 RNLTPVPSWG SQDFDYYKDA RHATFHVDQN FSNRQKNRAR DASPNAIQHH RGRPPFRENV 180 KTHSLGASCP PQEGERPKSA GSDKQDLVES VPPNPVGSGE KKDSSHSKSS ASESDTKRAK 240 QQFAQRSRVR KLQYISELER TVQALQAEGS EVSAELEFLN QQSLILSMEN KALKQRLENL 300 AQEQLIKYLE HEVLEKERGR LRALYQQQQL PQSQQQQQSS SSHRRTTSRD LDQQLADLSL 360 KHKDGSGQLH M |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975449 | 0.0 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009798548.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
Refseq | XP_009798549.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
Refseq | XP_009798550.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
Refseq | XP_009798551.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
TrEMBL | A0A1U7YH38 | 0.0 | A0A1U7YH38_NICSY; uncharacterized protein At4g06598-like | ||||
STRING | XP_009798548.1 | 0.0 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-81 | bZIP family protein |