PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009793989.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 189aa    MW: 20310.6 Da    PI: 4.6793
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009793989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-181768155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    + ykG+r++k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  XP_009793989.1 17 PVYKGIRRRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALKG 68
                    68*******************9.....4489***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.1E-121768IPR001471AP2/ERF domain
PROSITE profilePS5103222.6691876IPR001471AP2/ERF domain
SMARTSM003801.3E-311882IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-201878IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.7E-281878IPR001471AP2/ERF domain
PRINTSPR003672.7E-71930IPR001471AP2/ERF domain
CDDcd000182.50E-281978No hitNo description
PRINTSPR003672.7E-75878IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MSSPGASSSG GSSGRHPVYK GIRRRKSSGK WVSEIREPRS PNRIWLGTFP TPEMAAVAYD  60
VAALALKGRD AELNFPNSAS SLPVPTTNSP RDIQAAAACA AAALGAAGDA LGARRGVDNS  120
NNRPVSREVE NSTPWNNNEF MDEDLIFDMP NVIMNMAEGM LLSPPRFNVP DDDTSAAEYI  180
ADQDLWNYP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009793989.11e-135PREDICTED: ethylene-responsive transcription factor ERF024
RefseqXP_016455831.11e-135PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR01e-58ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A1S3YU881e-134A0A1S3YU88_TOBAC; ethylene-responsive transcription factor ERF024-like
TrEMBLA0A1U7Y4191e-134A0A1U7Y419_NICSY; ethylene-responsive transcription factor ERF024
STRINGXP_009793989.11e-135(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.14e-49ERF family protein