PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009792222.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 324aa MW: 37473.4 Da PI: 4.2958 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 78.6 | 1.4e-24 | 2 | 132 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 G rFhPtd e++ +yL v++++l+ ++ ++ +d+y ePw++ + +++++ yf ++++k+++t kr +r++ +g+Wk +gk +ev XP_009792222.1 2 GHRFHPTDREVL-KYLIGFVRDEPLHSQNElMQVADLYADkEPWQIFEvydqGNNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKPQGKGREV 95 99********99.9**********88766647777*997559****642332222244466********************************** PP NAM 93 lskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 ++ kg+l+g k+L + +++++ ++ +W+m ey+l XP_009792222.1 96 FDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 132 *****************656888889*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 27.987 | 1 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.0E-12 | 2 | 132 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.58E-27 | 2 | 155 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MGHRFHPTDR EVLKYLIGFV RDEPLHSQNE LMQVADLYAD KEPWQIFEVY DQGNNNNNNT 60 RYFITPQKKE KPTWKRVSRT VGKGTWKPQG KGREVFDDKG RLMGYVKSLK YIPANKSSNN 120 VNGEWLMTEY SLFDRYLAAR EIKNKGFVIC KIKKKGKPGD KKKGNNIDEV VNDENMRDIE 180 EFINTVLQED VQVEDNGIRS NGTIAKLDDQ ENNIIQYVEG DQVRDHVLGL LDSTEDIVDV 240 NDHEEYVEDC VDEGDEVQVH LLEEYIDSVL QSEDVQAEDN GMMSSNDIIA KDDEENMEYQ 300 VEDNQHATFW ASAEDVDLDT INFC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009792222.1 | 0.0 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1U7XJI4 | 0.0 | A0A1U7XJI4_NICSY; NAC domain-containing protein 78-like | ||||
STRING | XP_009792222.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-13 | NAC-domain protein 101 |