PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009791614.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 400aa MW: 44786.3 Da PI: 4.8496 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.8 | 4.1e-16 | 89 | 134 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 kGVr +k +g+++AeIrdps+ kr++lg+f+t + Aa+a++a + + XP_009791614.1 89 PKGVRMRK-WGKYAAEIRDPSQ---GKRIWLGTFDTVKAAAEAYDAKKAE 134 79****99.**********964...3*******************98876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 17.938 | 88 | 150 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.63E-15 | 88 | 135 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 8.5E-10 | 88 | 134 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.8E-6 | 89 | 100 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-17 | 90 | 147 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.55E-19 | 90 | 130 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 8.8E-20 | 90 | 136 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.8E-6 | 111 | 127 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 400 aa Download sequence Send to blast |
MMSNKERVND GCTGSVRKVR IIYDDPDATE SESENDHNIG NVVRIKRVVK EVNISSASLE 60 KKDSEKCSVK SSNKSLENKR VQIKSSSLPK GVRMRKWGKY AAEIRDPSQG KRIWLGTFDT 120 VKAAAEAYDA KKAEFDRRNL SERDKNLSSP RAPPECSTAC SSHPTNRTSS LYSHPSPSSV 180 LDVPTSSAAA AVECIDIPMK DTNRVPVLEV EQPASEIVEK QFFWPPSGCQ DLNLRFEDQM 240 LYEDPLIEQG TISNNLVEMT EFNITKTTKA RQPTIKICQK STKGIEDRRL NCTGQSITSP 300 SISAELKMMN FEETAVSGNN LKLLGFDENA LFGKDFTQTF DPYTDFIGLD SNFLCCDGLE 360 EFVYGMNEDF RDNVGANSPK LDDVELRWLD EVLIQDQSVL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009791614.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor CRF6-like | ||||
Refseq | XP_016474894.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor CRF6-like | ||||
TrEMBL | A0A1S4AE41 | 0.0 | A0A1S4AE41_TOBAC; ethylene-responsive transcription factor CRF6-like | ||||
TrEMBL | A0A1U7XXB2 | 0.0 | A0A1U7XXB2_NICSY; ethylene-responsive transcription factor CRF6-like | ||||
STRING | XP_009791614.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12718 | 15 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 6e-18 | ERF family protein |