PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009787362.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 317aa    MW: 36852 Da    PI: 4.9618
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009787362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.42.4e-2281333128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     p +rF Ptd el+ ++Lkk ++g++l+ e  i+ ++iy    Pw++  +   eek  yf s+ +k++++ kr +r+ ++g+Wka+    +++++k
  XP_009787362.1   8 PSVRFYPTDAELI-YFLKKFLKGESLPNECPIRLAEIYGDrPPWEISDH--PEEKIGYFISPLKKRKESHKRFRRTCANGTWKAQTGGDPIKNSK 99 
                     789**********.***********999667*******87478***733..344556***************************9999******* PP

             NAM  97 gelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     g++vg +k+ v+   + + +k  k +W+m ey +
  XP_009787362.1 100 GTVVGFRKSYVYRtrSSKGSKQDKINWLMREYYV 133
                     ************9443455666799*******75 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.42E-283155IPR003441NAC domain
PROSITE profilePS5100526.3126156IPR003441NAC domain
PfamPF023653.1E-148132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MSMVSWLPSV RFYPTDAELI YFLKKFLKGE SLPNECPIRL AEIYGDRPPW EISDHPEEKI  60
GYFISPLKKR KESHKRFRRT CANGTWKAQT GGDPIKNSKG TVVGFRKSYV YRTRSSKGSK  120
QDKINWLMRE YYVGDDYFWE NNIPKQDIVL CRIKKNITER NRNGVNMEEQ EVAQVIEAML  180
REPDYNSSQS ATISQRHQIM KAEYAEQQDN YLRGLNKNSQ ILTTYDRGEA TLENYGANTN  240
RVYVMTEEAN TAESGQEEAY GQLSFPGIHE QYCAEADLNT DNSDFSDLNA DNSDFLELTL  300
TNGIEDIVPD DWWHQFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-11115612165NO APICAL MERISTEM PROTEIN
1ut4_B2e-11115612165NO APICAL MERISTEM PROTEIN
1ut7_A2e-11115612165NO APICAL MERISTEM PROTEIN
1ut7_B2e-11115612165NO APICAL MERISTEM PROTEIN
3swm_A3e-11115615168NAC domain-containing protein 19
3swm_B3e-11115615168NAC domain-containing protein 19
3swm_C3e-11115615168NAC domain-containing protein 19
3swm_D3e-11115615168NAC domain-containing protein 19
3swp_A3e-11115615168NAC domain-containing protein 19
3swp_B3e-11115615168NAC domain-containing protein 19
3swp_C3e-11115615168NAC domain-containing protein 19
3swp_D3e-11115615168NAC domain-containing protein 19
4dul_A2e-11115612165NAC domain-containing protein 19
4dul_B2e-11115612165NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009787362.10.0PREDICTED: NAC transcription factor 29-like
RefseqXP_016447919.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A1S3Y7L10.0A0A1S3Y7L1_TOBAC; NAC transcription factor 29-like
TrEMBLA0A1U7X5I40.0A0A1U7X5I4_NICSY; NAC transcription factor 29-like
STRINGXP_009787362.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-17NAC domain containing protein 2