PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009785426.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 323aa MW: 34940 Da PI: 8.205

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009785426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	207	5.1e-64	2	145	1	148
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ++++r p+wkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGtty+kg+kp ++++ + sas+sp+ss+q XP_009785426.1 2 TSGTRLPSWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWIVEEDGTTYKKGCKPVQRMDNICYSASVSPCSSYQ 96 5899***************************************************************************************** PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148 +sp +sy++sp+sssfpsp+s+ i +a++ +sl+p+l++ls+ ss XP_009785426.1 97 --------PSPGASYNPSPASSSFPSPVSSHYIANAQNntdpNSLIPWLKNLSSGSS 145 ........9****************9999888778999*******998443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.6E-65	4	141	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence Send to blast
MTSGTRLPSW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG 60 WIVEEDGTTY KKGCKPVQRM DNICYSASVS PCSSYQPSPG ASYNPSPASS SFPSPVSSHY 120 IANAQNNTDP NSLIPWLKNL SSGSSPSSSK FPHHLYIPGS SISAPVTPPL SSPTAHTPRM 180 RDDPKANSTW IRQNYAFLPS STPASPGCQT PLDSGWLSGV QTPQDEPSSP TFSLVSPNPF 240 GFREPLSNGG SRMWTPGQSG VCSPAIGAGI DQTADVPMSD AISAEFAFGS NMKGLVKPWE 300 GERIHEECLT DDLELTLGNS STK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009785426.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like
Swissprot	Q9ZV88	1e-126	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A1U7X6X6	0.0	A0A1U7X6X6_NICSY; BES1/BZR1 homolog protein 4-like
STRING	XP_009785426.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1984	24	64

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-104	BES1/BZR1 homolog 4