PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009783721.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 826aa MW: 93684.8 Da PI: 5.6357

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009783721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	50	5.9e-16	637	681	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is ++l+++F +++ dAAk+Lgv ++LKr CR y I RWP+ k XP_009783721.1 637 GISRSVLEEQFGKKLSDAAKSLGVARSTLKRMCRDYDIYRWPRSK 681 6999**************************************865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.866	619	707	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.60	2.2E-4	622	673	IPR009057	Homeodomain-like
Pfam	PF02042	4.2E-13	638	681	IPR003035	RWP-RK domain
SuperFamily	SSF54277	6.54E-17	739	824	No hit	No description
PROSITE profile	PS51745	19.571	742	826	IPR000270	PB1 domain
Pfam	PF00564	8.0E-15	742	824	IPR000270	PB1 domain
SMART	SM00666	7.1E-16	742	825	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	2.9E-15	743	823	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 826 aa Download sequence Send to blast
MRERKRNDGI NRWVFWTQHN GDELNQVKSL FPILRDSTQP DTNGDCQLNR LTIKNLVELL 60 DVQGTCLIQF WSPIRNNGGK TFLTTADQPF SFNGKIHEGL WAYRRVSLHT IASVDATEID 120 ETKRICVHGR PARVFRSGMP EFSPHVRYYY MDEYPLRNFA MCLGVGSYWT LPVFESSGDR 180 CIGVLEYAFE ANVGLDLYSI LDRLINNHRI LKTMGLALIP SWLACPQEIQ EVWEQELAQV 240 KEALDVTCKT HMLLFAQTWI PVLDSSRTQM LITSPPTKYW SEEISSLEFL AVSDLHHVQI 300 GQGLVGKVLS SKGSCFCRDI TQLSIDFYPL VPIARCAGFT ACFAIFVRLN SACHMVLEFF 360 LPRDEMLDRN PQSFLSKLLA TIREQLPSFF LDSGPSLFVE VIRTAPVDEL DSFEINQPQQ 420 VVRSKGNEKV VHFDSLNQDT ADLGPSSSTD IGAHYMEITN HTPDNGEETV LQDSAHKQGV 480 EEADAMDKEK SSVHFKENKF AYTDSDILAT SFVDSEQNLS TDKASLDEKL DSFKIGHRQL 540 PSMVQYNTIN QIFGFDPSSS SDLEEIVTAD YGRDTQMNLQ SKKRGESTQP DSAHQQTVEE 600 ADVADKRKHS VHVEENTNSQ NCPEKHKRIK RIEKEYGISR SVLEEQFGKK LSDAAKSLGV 660 ARSTLKRMCR DYDIYRWPRS KSANDVCSLS ENKPVKRVEK QMGNSSREDL QLPHASLSNG 720 MDTTTTLTQR KVPIATFQSD NTMSVKVTYK DVTIRFPLSL SSGKIDLETE VEKRLKLVPV 780 GSYSIKYEDE DNDWIAITCD SDLEYGIHTL RSLGRTTMKM LVEPLN

Sequence ? help Back to Top

Protein Sequence Length: 826 aa Download sequence Send to blast

MRERKRNDGI NRWVFWTQHN GDELNQVKSL FPILRDSTQP DTNGDCQLNR LTIKNLVELL  60
DVQGTCLIQF WSPIRNNGGK TFLTTADQPF SFNGKIHEGL WAYRRVSLHT IASVDATEID  120
ETKRICVHGR PARVFRSGMP EFSPHVRYYY MDEYPLRNFA MCLGVGSYWT LPVFESSGDR  180
CIGVLEYAFE ANVGLDLYSI LDRLINNHRI LKTMGLALIP SWLACPQEIQ EVWEQELAQV  240
KEALDVTCKT HMLLFAQTWI PVLDSSRTQM LITSPPTKYW SEEISSLEFL AVSDLHHVQI  300
GQGLVGKVLS SKGSCFCRDI TQLSIDFYPL VPIARCAGFT ACFAIFVRLN SACHMVLEFF  360
LPRDEMLDRN PQSFLSKLLA TIREQLPSFF LDSGPSLFVE VIRTAPVDEL DSFEINQPQQ  420
VVRSKGNEKV VHFDSLNQDT ADLGPSSSTD IGAHYMEITN HTPDNGEETV LQDSAHKQGV  480
EEADAMDKEK SSVHFKENKF AYTDSDILAT SFVDSEQNLS TDKASLDEKL DSFKIGHRQL  540
PSMVQYNTIN QIFGFDPSSS SDLEEIVTAD YGRDTQMNLQ SKKRGESTQP DSAHQQTVEE  600
ADVADKRKHS VHVEENTNSQ NCPEKHKRIK RIEKEYGISR SVLEEQFGKK LSDAAKSLGV  660
ARSTLKRMCR DYDIYRWPRS KSANDVCSLS ENKPVKRVEK QMGNSSREDL QLPHASLSNG  720
MDTTTTLTQR KVPIATFQSD NTMSVKVTYK DVTIRFPLSL SSGKIDLETE VEKRLKLVPV  780
GSYSIKYEDE DNDWIAITCD SDLEYGIHTL RSLGRTTMKM LVEPLN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009783721.1	0.0	PREDICTED: protein NLP7-like isoform X3
TrEMBL	A0A1U7X226	0.0	A0A1U7X226_NICSY; protein NLP7-like isoform X3
STRING	XP_009783719.1	0.0	(Nicotiana sylvestris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-46	Nin-like family protein