PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009783609.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 231aa MW: 23997.3 Da PI: 10.0628

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009783609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	114.1	2.2e-35	17	111	6	95
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.....eeaeaagssasaspesslq 95 ++++ E+E++k RER+RRai++ki+ GLR++G+y+l r+D+n+Vl+ L+ eAGw+v++DGttyr +s+ + + ++g+s+ a+p+ss+ XP_009783609.1 17 RRSAVEKEKTKMRERQRRAITTKIFNGLRKHGGYRLSPRSDINQVLRHLASEAGWIVDPDGTTYRSSSSSTnnnscPHCGVGGKSNAATPTSSTV 111 46778************************************************************887777544434445677788888888865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.9E-31	18	157	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence Send to blast
MKESAAGQQR SNNSNGRRSA VEKEKTKMRE RQRRAITTKI FNGLRKHGGY RLSPRSDINQ 60 VLRHLASEAG WIVDPDGTTY RSSSSSTNNN SCPHCGVGGK SNAATPTSST VGHTSGGGGE 120 CSTTASPLRA TANCGDTKTT YSRTPATNLF DSGFSLSGGV STSALLSSTS SDTLFSIYMS 180 GACGGAGVGG ISGVYHPSSA ASATVRHQEQ PSYLLQEVRA SNQNTPVGSP L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009783609.1	1e-168	PREDICTED: beta-amylase 7-like isoform X1
Refseq	XP_009783610.1	1e-168	PREDICTED: beta-amylase 7-like isoform X1
TrEMBL	A0A1U7XAY1	1e-167	A0A1U7XAY1_NICSY; beta-amylase 7-like isoform X1
STRING	XP_009783609.1	1e-168	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15594	6	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	3e-20	beta-amylase 7