PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009783385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 255aa MW: 28608.5 Da PI: 6.8043 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.6 | 2.7e-08 | 183 | 229 | 15 | 61 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +A rsR RK++ i+eLe+ v++L+ae +L ele l ++ l + XP_009783385.1 183 QSAHRSRVRKLQHIAELERTVQALQAEGYELSAELEFLDQQNIILSM 229 69**********************************99988765555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.2E-4 | 174 | 233 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 4.32E-15 | 174 | 225 | No hit | No description |
SuperFamily | SSF57959 | 7.88E-7 | 182 | 226 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-8 | 183 | 227 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MHPSFEISLE MESSNGSSRL KNFSFSNKQL IMDSTSEGSG SGSSHHHRCN SESFLIEEQP 60 SWLDDLLNEP AETLVVHKGH RRSASDTFAY LGAAAERLNT REINNNVNVG GSSINYVSYK 120 DHLTSSVSYD TKPTSAKAAL ELNEKHNREV ISTQNKEGSS ERSNNTQAKH SMSKADAKRA 180 KQQSAHRSRV RKLQHIAELE RTVQALQAEG YELSAELEFL DQQNIILSME NRPDTKWLNL 240 LFRTDHPSAE LLRPA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975450 | 1e-57 | HG975450.1 Solanum pennellii chromosome ch11, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009783385.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
TrEMBL | A0A1U7XAA5 | 0.0 | A0A1U7XAA5_NICSY; uncharacterized protein At4g06598-like | ||||
STRING | XP_009783385.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11445 | 20 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 2e-21 | bZIP family protein |