PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009780539.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | EIL | ||||||||
Protein Properties | Length: 496aa MW: 56795.1 Da PI: 4.952 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 394.2 | 1.8e-120 | 32 | 366 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 ++lk+rmwkdqmll++lk+++ ++ +ke+ +++++ k +eq+rrkk+sraQD+iL YM+k+mevc qGfv+gi+pekgk+v+g+sdsLr+WW XP_009780539.1 32 DDLKRRMWKDQMLLQKLKSMRSSS--KKESIDDESQQAKAQEQSRRKKTSRAQDSILMYMVKIMEVCGGQGFVFGIVPEKGKLVTGSSDSLRGWW 124 79******************9985..477778899999********************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskd 189 +ekv+f++n+p+ai++ + l++++e++ +ss+ h l+elqD+tlgSLLsalmqhc ppqr fple+g++pPWWPtGkelww +g l+ + XP_009780539.1 125 REKVKFEKNAPIAIAECLPGLLVQQQENDILDPSSSYMHLLEELQDATLGSLLSALMQHCIPPQRTFPLERGLSPPWWPTGKELWWRDQGlLALE 219 *****************99999999999886669999*****************************************************9999* PP --.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXX..X CS EIN3 190 qgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqk..e 282 qg+ppy+kphdl kawkvsvL+avikhmsp++ ++r+l+ +sk+lq+km+ake+ ++++v+nqe+++++ l ++++++s++++ e XP_009780539.1 220 QGPPPYRKPHDLNKAWKVSVLAAVIKHMSPDLGRMRRLVIKSKSLQNKMTAKETSTWCKVVNQEQALLE--------L--TQRALKISEKEDdkE 304 ****************************************************************99772........3..444555555544003 PP XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 283 dvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 d+ + s ++ + krk++++++a+ ++++v + cq+ ++ +s l+f dkns+ ++e XP_009780539.1 305 DNLAFDGST-STLR--------RNDMKRKSNFEHRAMNMEQDVFYACQNLNCAQSGLGLGFVDKNSRIEHE 366 333333333.2222........234588889999999999***************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.6E-110 | 32 | 283 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.1E-63 | 158 | 288 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 3.01E-56 | 162 | 286 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0080167 | Biological Process | response to karrikin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence Send to blast |
MMQFEEMTEP LSPIGEVEEP EEEENEEVIS YDDLKRRMWK DQMLLQKLKS MRSSSKKESI 60 DDESQQAKAQ EQSRRKKTSR AQDSILMYMV KIMEVCGGQG FVFGIVPEKG KLVTGSSDSL 120 RGWWREKVKF EKNAPIAIAE CLPGLLVQQQ ENDILDPSSS YMHLLEELQD ATLGSLLSAL 180 MQHCIPPQRT FPLERGLSPP WWPTGKELWW RDQGLLALEQ GPPPYRKPHD LNKAWKVSVL 240 AAVIKHMSPD LGRMRRLVIK SKSLQNKMTA KETSTWCKVV NQEQALLELT QRALKISEKE 300 DDKEDNLAFD GSTSTLRRND MKRKSNFEHR AMNMEQDVFY ACQNLNCAQS GLGLGFVDKN 360 SRIEHEISCS HRDDQQRLNL SINSTTFSSL INEAQLKPHE ESIFGREGEI IFQQDLMNNM 420 EVERSSVNCH TQISDAVLEN LKNFWGDNNV VLEQLDYDLT TNGNMNSNGT PSQDVDLNHD 480 AATCIWDLAY DDRFKG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 7e-55 | 160 | 286 | 1 | 126 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 7e-55 | 160 | 286 | 1 | 126 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009780539.1 | 0.0 | PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X1 | ||||
Swissprot | Q9LX16 | 1e-127 | EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
TrEMBL | A0A1U7X0Z0 | 0.0 | A0A1U7X0Z0_NICSY; putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X1 | ||||
STRING | XP_009780539.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10120.1 | 1e-127 | EIL family protein |
Publications ? help Back to Top | |||
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