PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009779356.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 500aa MW: 55795.4 Da PI: 6.6836 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.4 | 4.3e-10 | 197 | 235 | 5 | 43 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 k rr+++NReAA++sR+RKka++++Le+ L++ + XP_009779356.1 197 KTLRRLAQNREAAKKSRLRKKAYVQQLETSRIRLSQLEQ 235 7789************************86555555444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-7 | 191 | 239 | No hit | No description |
SMART | SM00338 | 2.4E-7 | 193 | 270 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.105 | 195 | 239 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-7 | 197 | 235 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.64E-7 | 197 | 239 | No hit | No description |
CDD | cd14708 | 3.68E-22 | 197 | 249 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 200 | 215 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.6E-32 | 278 | 352 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence Send to blast |
MASQGIGETG LTNSGPSNHH NMPYAVFRGL NPASSISFIY HSTPNNPEGT FDFGELEEAF 60 ALQGFKINND EAKASLYAAT TGKPAATLDM FPSWPMRFQD TLKENSKSRE EESSESGSFS 120 SRAQAHLEPE SPISRKASSE QNQLQITQQQ QQQLHQEMSS DNNPRTGNLQ TELASKPNNM 180 EKRKGAGSTS ERMADPKTLR RLAQNREAAK KSRLRKKAYV QQLETSRIRL SQLEQELQRA 240 RSQGIFLGGG TAAGANISSG AALFDMEYSR WLDDDHRHMS ELRTALQAHL SDGDLRLIVD 300 GYIAHYDEIF SLKGVAAKSD VFHLITGMWT TPAERCFLWM GGFRPSELIK MLIGQLDPLT 360 EQQLMGIYSL QQSSQQAEDA LSQGLEQLQQ SLVDTVASGS INDGMHHMAL ALGKLSNLEG 420 FVRQADNLRQ QTLHQLHRIL TVRQAARCFL VIGEYYGRLR ALSSLWLSRP RETLIADDTS 480 CQTTTELQMV HSSQNYFSNF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00131 | DAP | Transfer from AT1G08320 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT693387 | 0.0 | KT693387.1 Capsicum annuum AILZ1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009779356.1 | 0.0 | PREDICTED: transcription factor TGA2 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A1U7WPX7 | 0.0 | A0A1U7WPX7_NICSY; transcription factor TGA2 | ||||
STRING | XP_009779356.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3683 | 23 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 0.0 | bZIP family protein |
Publications ? help Back to Top | |||
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