PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009777020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 277aa MW: 31122 Da PI: 6.0574 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.6 | 4.5e-08 | 156 | 203 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR +iN+++ L++++P + k + a +L + ++Y++sLq XP_009777020.1 156 SHSLAERVRRGKINEKLRCLQDIVPGC----YKTMGMAGMLDEIINYVQSLQ 203 8*************************8....35599999********99998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.29E-9 | 150 | 207 | No hit | No description |
SuperFamily | SSF47459 | 7.46E-16 | 150 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.7E-16 | 152 | 214 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.888 | 152 | 202 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.8E-5 | 156 | 203 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 9.7E-8 | 158 | 208 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence Send to blast |
MADHFINSPF SLFNIDSSMD FMNQFPEIIN PCSSELSSFN LQSSMEFSHE NIFTQVAEFP 60 GNLQEYFQEN IQQDEKINAS LVSSDMVPIN ESKKRKTIDT PESSSAYSSP AVSATGTKRR 120 SIKRRGNSVK SSDEKEEEKP KEVVHVRAKR GQATDSHSLA ERVRRGKINE KLRCLQDIVP 180 GCYKTMGMAG MLDEIINYVQ SLQNQVEFLS MKLTAASSYY DFNSESDILV SMQRAKAFEA 240 LKMQKGKKEL GCEGLSSNQA GPYDHSFGTF PLLPFNT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009777020.1 | 0.0 | PREDICTED: transcription factor BEE 3-like | ||||
Swissprot | Q8GWK7 | 2e-63 | BEE3_ARATH; Transcription factor BEE 3 | ||||
TrEMBL | A0A1U7WS06 | 0.0 | A0A1U7WS06_NICSY; transcription factor BEE 3-like | ||||
STRING | XP_009777020.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3971 | 23 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73830.1 | 3e-59 | BR enhanced expression 3 |
Publications ? help Back to Top | |||
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