PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009777001.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 418aa    MW: 46132.1 Da    PI: 6.5275
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009777001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-17228278155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  + +Wv+e+r+ps+   +kr++lg++ tae+Aa+a++ a+++l+g
  XP_009777001.1 228 PVYRGVRRRN-NDKWVCELREPST---QKRIWLGSYPTAEMAARAHDVAALALRG 278
                     68*****887.8*********965...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.0E-12228278IPR001471AP2/ERF domain
PROSITE profilePS5103221.483229286IPR001471AP2/ERF domain
SMARTSM003802.2E-27229292IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-28229288IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-20229288IPR016177DNA-binding domain
PRINTSPR003671.4E-6230241IPR001471AP2/ERF domain
CDDcd000182.22E-28230288No hitNo description
PRINTSPR003671.4E-6252268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MWDAWFNGKE PPSVIPRFPE LIPRSGEVTN ATVPNPLIPC GYPLKLSNDP GMPSVVRPQA  60
PASRAPPPTF IFQGPQLQQE KTYAQEADYF RNMMFVVGKP FVEAIKIGEM VENGLKTGRI  120
LSHVAFKATS PDVQNGSEGL INGNGVEEGV MIVSSSRGAR SNKQATTVLS TYNYKKLSNL  180
EPCSTMNNSS SCSSVRVAVS DEEDINILAL RKPKKRAGRK KFKETRHPVY RGVRRRNNDK  240
WVCELREPST QKRIWLGSYP TAEMAARAHD VAALALRGPL ATLNFADSAW RLPVPVSKDP  300
KDLRHAAAKA AEPFWSGEET DVNSRVAANT GNGSEEMKAA AEEDNAVYNC MQNIVTAENV  360
LYSNYSCSEV GMVGTQEWQA NMEERSLFSP NPCLLGSCFS WDDDVESDVE VSLWSYSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009777001.10.0PREDICTED: uncharacterized protein LOC104226669
TrEMBLA0A1U7WIB70.0A0A1U7WIB7_NICSY; uncharacterized protein LOC104226669
STRINGXP_009777001.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.14e-35ERF family protein