PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009776936.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 363aa MW: 41301.1 Da PI: 7.5429 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.9 | 2.9e-10 | 80 | 109 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 k++rr+++NReAAr+sR RKka++++Le+ XP_009776936.1 80 EKVQRRLAQNREAARKSRMRKKAYVQQLET 109 599*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.3E-6 | 77 | 137 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-9 | 77 | 121 | No hit | No description |
PROSITE profile | PS50217 | 9.117 | 79 | 123 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.19E-7 | 81 | 116 | No hit | No description |
Pfam | PF00170 | 3.7E-7 | 81 | 111 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 84 | 99 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.1E-28 | 167 | 240 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MNMTSPTTQF APTRRMGIYE PFHQMSVWED AFRGDIMPSS DPCMVSQPND RPDDKSGYTS 60 GEQHMPSGSG DNQAPRSTSE KVQRRLAQNR EAARKSRMRK KAYVQQLETS RLKLAQLELE 120 LERARQQGLY MLGSNSNMGL LGTINPGIAA FEMEYSHWVE EQQKKNAELR SILQSPVSEM 180 ELQLLVENVL SHYFNLFRMK ADAAKADVFY LMSGMWRTTV ERFFLWIGGF KPSDLINVVM 240 PQLEPLTDQQ IIKVCNLRHC CQQAEDALTQ GMDKLQQTLA QSILNMTTGA GNYSSQMVSS 300 MENLEALESF VNQADHLRQQ TLQQMSIILT TRQAARGLLA FGEYLQRLRA LSSLWAARPR 360 EPT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT014216 | 0.0 | BT014216.1 Lycopersicon esculentum clone 133394F, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009776929.1 | 0.0 | PREDICTED: transcription factor TGA1-like | ||||
Refseq | XP_009776936.1 | 0.0 | PREDICTED: transcription factor TGA1-like | ||||
Refseq | XP_016467889.1 | 0.0 | PREDICTED: transcription factor TGA1-like | ||||
Refseq | XP_016467890.1 | 0.0 | PREDICTED: transcription factor TGA1-like | ||||
Swissprot | Q39237 | 1e-156 | TGA1_ARATH; Transcription factor TGA1 | ||||
TrEMBL | A0A1S3ZU80 | 0.0 | A0A1S3ZU80_TOBAC; transcription factor TGA1-like | ||||
TrEMBL | A0A1U7WI51 | 0.0 | A0A1U7WI51_NICSY; transcription factor TGA1-like | ||||
STRING | XP_009776929.1 | 0.0 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.5 | 1e-144 | bZIP family protein |