PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009776179.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 274aa    MW: 31594.5 Da    PI: 4.6781
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009776179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19116166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  XP_009776179.1 116 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFNTAEEAAMAYDKAALRIRG 166
                     7********.**********3...2234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.0E-31115175IPR001471AP2/ERF domain
CDDcd000181.55E-30116174No hitNo description
SuperFamilySSF541711.11E-23116176IPR016177DNA-binding domain
PROSITE profilePS5103223.907116174IPR001471AP2/ERF domain
PfamPF008471.4E-14116166IPR001471AP2/ERF domain
SMARTSM003802.2E-37116180IPR001471AP2/ERF domain
PRINTSPR003674.4E-11117128IPR001471AP2/ERF domain
PRINTSPR003674.4E-11140156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MKYSLKMTHV EKNQEQEVAC EEILENVWAN FISKNEANEK AQRETNELCP EKWEELPSLE  60
RLPSLGRWIS MGADTWEDLL NEILPPNDKM HSNDESTSKN EDVKVEKKKM VITTRHYRGV  120
RRRPWGKYAA EIRDSSRKGA RVWLGTFNTA EEAAMAYDKA ALRIRGPKAY LNFPLETVAQ  180
AMGISFPEQE WTFPSAVSQI GGAYLGWDDH SISNSRKRVS RDWSMFEDLD VINQLPLQKK  240
IMRNGEEDLD QSDLDILEFE DLGSDYLDSL LSSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-28115175161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009776179.10.0PREDICTED: ethylene-responsive transcription factor ERF091
TrEMBLA0A1U7WND20.0A0A1U7WND2_NICSY; ethylene-responsive transcription factor ERF091
STRINGXP_009776179.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112371823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.16e-26ERF family protein