PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009775469.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 326aa    MW: 38197.4 Da    PI: 4.9778
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009775469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.21.6e-36221442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevls 94 
                     p G+ F Ptd elv +yLkkk++g+ l+  + i+e+ i++++P++L  + +++e++wyfF+ r+++y++g+++nr  + ++gyWkatg d ev+ 
  XP_009775469.1  22 PIGYMFLPTDGELVEFYLKKKINGEALPR-NRIREICINHHHPQELC-NSQQRERSWYFFTGRKRRYKNGRKPNRqvIGNKGYWKATGVDSEVKY 114
                     89*************************99.77**************7.6677899********************633569*************9 PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +g+ vg k tL fy   +++g+k++W mheyrl
  XP_009775469.1 115 -NGQIVGYKMTLDFY---EQNGVKSQWKMHEYRL 144
                     .999***********...7999**********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.14E-4020172IPR003441NAC domain
PROSITE profilePS5100541.0421173IPR003441NAC domain
PfamPF023653.8E-2122144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MEINRENYNQ ILSDEQFFDS IPIGYMFLPT DGELVEFYLK KKINGEALPR NRIREICINH  60
HHPQELCNSQ QRERSWYFFT GRKRRYKNGR KPNRQVIGNK GYWKATGVDS EVKYNGQIVG  120
YKMTLDFYEQ NGVKSQWKMH EYRLDRKSSL PDANTSIENQ ELDKYVLCEI YINTKAKNVN  180
KRSKRENDSE DLPTDDDESM NSPNNDNIIQ DTDSTEPSSY SSILSDINMY PYEAKMEHEN  240
FLGFKNNVEF GDQFIQEIRS NFLSSSNYDQ PSILRECEML CAPDCPSNYD QISNFGDGNF  300
HGFQGFDELG AVIKHLFPEM KNEKSI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-292117115166Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775469.10.0PREDICTED: NAC domain-containing protein 67-like
RefseqXP_016507092.10.0PREDICTED: NAC domain-containing protein 67-like
TrEMBLA0A1S4D0Z70.0A0A1S4D0Z7_TOBAC; NAC domain-containing protein 67-like
TrEMBLA0A1U7WLC90.0A0A1U7WLC9_NICSY; NAC domain-containing protein 67-like
STRINGXP_009775469.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1533968
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.14e-31NAC domain containing protein 25