PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009775198.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 619aa    MW: 69785.6 Da    PI: 4.627
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009775198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.49.7e-52231492128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ppGfrFhPtdeelv +yLkkk+ +k++ l ++i+e+d+yk++P+dLp  +k+k+++++w+fFs+rd+ky++g r+nratk+gyWkatgkd+ +++
  XP_009775198.1  23 PPGFRFHPTDEELVLYYLKKKICRKRILL-DAIAETDVYKWDPEDLPdlSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWKATGKDRIITC 116
                     9*************************999.99**************96559999***************************************** PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kktLv+ykgrap ge+tdWvmhey++
  XP_009775198.1 117 -NSRAVGVKKTLVYYKGRAPVGERTDWVMHEYTM 149
                     .999****************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-5919172IPR003441NAC domain
PROSITE profilePS5100555.1222172IPR003441NAC domain
PfamPF023652.6E-2723148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MKMLELIDSD SFACFGSSKN AFPPGFRFHP TDEELVLYYL KKKICRKRIL LDAIAETDVY  60
KWDPEDLPDL SKLKTGDRQW FFFSPRDRKY PNGARSNRAT KHGYWKATGK DRIITCNSRA  120
VGVKKTLVYY KGRAPVGERT DWVMHEYTMD EEELKRCQNV HDYYALYKVF KKSGPGPKNN  180
EQYGAPFREE DWVDDECPSA KASVRPVDDE RPSAKASVRQ DTSAKHVNEA PSVDGGLEEL  240
LNNTADEAVL VEPLCADYDY ALEQLVYEED TESTLLDHSS REVNFPNHSA VIAPGCQHYH  300
VKESFDLTQS GTSQLQLHEA PEVTSAPVSW EQQRHVVEED FLEDYLEMND LLGPEPSIQN  360
FDNPELGVKN FDEAGPSGQN FDKPSGNFED LQFDYLDGLT EFDLYHDTPF LLDDIRTTDV  420
GQITEPYMNN FVNGAVNPVS TTYLSTFQNE MVNHQPMYLN NGEQISNQLW THDQRFNIYN  480
PSEANQLVVP PAISGVVYDS NLANHPMGAS QNQIVRQDDG TPSWFSSQLW AFVDSIPTTP  540
AAAAESPLVN GAFKRMSSFS KLRINARNMN VVAGNTVTSS SSGNSKNGVF YFSFLGILCA  600
ILCVLVGTFV KVFGRYISS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-472214915140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775198.10.0PREDICTED: uncharacterized protein LOC104225129 isoform X1
TrEMBLA0A1U7W9880.0A0A1U7W988_NICSY; uncharacterized protein LOC104225129 isoform X1
STRINGXP_009775198.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-122NAC domain containing protein 17