PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009775198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 619aa MW: 69785.6 Da PI: 4.627 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.4 | 9.7e-52 | 23 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLkkk+ +k++ l ++i+e+d+yk++P+dLp +k+k+++++w+fFs+rd+ky++g r+nratk+gyWkatgkd+ +++ XP_009775198.1 23 PPGFRFHPTDEELVLYYLKKKICRKRILL-DAIAETDVYKWDPEDLPdlSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWKATGKDRIITC 116 9*************************999.99**************96559999***************************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLv+ykgrap ge+tdWvmhey++ XP_009775198.1 117 -NSRAVGVKKTLVYYKGRAPVGERTDWVMHEYTM 149 .999****************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-59 | 19 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.12 | 22 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.6E-27 | 23 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 619 aa Download sequence Send to blast |
MKMLELIDSD SFACFGSSKN AFPPGFRFHP TDEELVLYYL KKKICRKRIL LDAIAETDVY 60 KWDPEDLPDL SKLKTGDRQW FFFSPRDRKY PNGARSNRAT KHGYWKATGK DRIITCNSRA 120 VGVKKTLVYY KGRAPVGERT DWVMHEYTMD EEELKRCQNV HDYYALYKVF KKSGPGPKNN 180 EQYGAPFREE DWVDDECPSA KASVRPVDDE RPSAKASVRQ DTSAKHVNEA PSVDGGLEEL 240 LNNTADEAVL VEPLCADYDY ALEQLVYEED TESTLLDHSS REVNFPNHSA VIAPGCQHYH 300 VKESFDLTQS GTSQLQLHEA PEVTSAPVSW EQQRHVVEED FLEDYLEMND LLGPEPSIQN 360 FDNPELGVKN FDEAGPSGQN FDKPSGNFED LQFDYLDGLT EFDLYHDTPF LLDDIRTTDV 420 GQITEPYMNN FVNGAVNPVS TTYLSTFQNE MVNHQPMYLN NGEQISNQLW THDQRFNIYN 480 PSEANQLVVP PAISGVVYDS NLANHPMGAS QNQIVRQDDG TPSWFSSQLW AFVDSIPTTP 540 AAAAESPLVN GAFKRMSSFS KLRINARNMN VVAGNTVTSS SSGNSKNGVF YFSFLGILCA 600 ILCVLVGTFV KVFGRYISS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-47 | 22 | 149 | 15 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009775198.1 | 0.0 | PREDICTED: uncharacterized protein LOC104225129 isoform X1 | ||||
TrEMBL | A0A1U7W988 | 0.0 | A0A1U7W988_NICSY; uncharacterized protein LOC104225129 isoform X1 | ||||
STRING | XP_009775198.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3212 | 24 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 1e-122 | NAC domain containing protein 17 |