PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009774531.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 377aa    MW: 43622.9 Da    PI: 6.3801
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009774531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.42.5e-31171442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevls 94 
                     p G+rF P+d++l+  yL  kv+g+ ++    i+++diy++ P +L   ++ eek +yfF++r++ky++g ++ r+t+  +gyWk t k +++++
  XP_009774531.1  17 PIGYRFVPNDQQLL-LYLLYKVKGEFIPP-GLIQDADIYECSPFQLS-GMDMEEKYTYFFTRRERKYPNGFKTDRSTRdgKGYWKITSKLTPIFT 108
                     89************.8999*******999.89**************8.677788999******************9987789************* PP

             NAM  95 kkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +++ + g k++Lv+y  + + ++  kt+W+mhe +l
  XP_009774531.1 109 AGNLQFGKKNVLVYYlkTPKGQNDIKTNWIMHELEL 144
                     ***************4323555566********876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.89E-3512167IPR003441NAC domain
PROSITE profilePS5100536.55716169IPR003441NAC domain
PfamPF023651.1E-1517143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MSEAKEEGSH QYMKQYPIGY RFVPNDQQLL LYLLYKVKGE FIPPGLIQDA DIYECSPFQL  60
SGMDMEEKYT YFFTRRERKY PNGFKTDRST RDGKGYWKIT SKLTPIFTAG NLQFGKKNVL  120
VYYLKTPKGQ NDIKTNWIMH ELELNKSLFP RHAPEEKFND FIVCRIYDRE KRKGDDQRDM  180
VNSLIEPKQV MNHNNGEPLR STKRKFKINK TIINSNYLYN GHELQATAAS DLGQTSSADI  240
MSTIMANPIA DNHPQQVVQH THVTGDQNVH LSNNNNNNIS NVFPRDVYLS GEQNINSGHH  300
RLVKSEGNVF NDPKLESSTS QHMRGDESIP LVPENDCWPP SEEFWDGLPD MPPMDDFSNY  360
MDLLGFDLDQ TQPKTLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-241717018166NO APICAL MERISTEM PROTEIN
1ut4_B8e-241717018166NO APICAL MERISTEM PROTEIN
1ut7_A8e-241717018166NO APICAL MERISTEM PROTEIN
1ut7_B8e-241717018166NO APICAL MERISTEM PROTEIN
3swm_A1e-231717021169NAC domain-containing protein 19
3swm_B1e-231717021169NAC domain-containing protein 19
3swm_C1e-231717021169NAC domain-containing protein 19
3swm_D1e-231717021169NAC domain-containing protein 19
3swp_A1e-231717021169NAC domain-containing protein 19
3swp_B1e-231717021169NAC domain-containing protein 19
3swp_C1e-231717021169NAC domain-containing protein 19
3swp_D1e-231717021169NAC domain-containing protein 19
4dul_A8e-241717018166NAC domain-containing protein 19
4dul_B8e-241717018166NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774531.10.0PREDICTED: NAC domain-containing protein 19-like
TrEMBLA0A1U7WBC40.0A0A1U7WBC4_NICSY; NAC domain-containing protein 19-like
STRINGXP_009774531.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1786734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.16e-24NAC domain containing protein 102