PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009774203.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 319aa    MW: 36780.7 Da    PI: 8.4412
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009774203.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like62.49e-20132183255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      rl+Wtp+L ++F +av++LG  +kA Pk i+e+m+++ Lt ++++ HLQkYR+
  XP_009774203.1 132 RRLQWTPDLEKKFKKAVRRLG--QKARPKLIMEMMDIPNLTQKQIANHLQKYRV 183
                     69******************4..78****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011015.729167IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.44E-6166No hitNo description
SuperFamilySSF521721.76E-11275IPR011006CheY-like superfamily
PfamPF000725.5E-5261IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23005.7E-15287No hitNo description
PROSITE profilePS5129413.957128186IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.9E-20128185IPR009057Homeodomain-like
SuperFamilySSF466898.07E-13129186IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-16132184IPR006447Myb domain, plants
PfamPF002499.7E-11133182IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MVDVNMAEMD CFEFINSTQL IKDMPVILMS SNVKRGMMEQ AVAQGVCFFF MKPISTKKLK  60
NIWQHVYRHQ KKANQKSENN KANNQVEVMD STTCANKKMQ DTKGKTIVNS AEEEDHSLVS  120
EKTMDGQQKK RRRLQWTPDL EKKFKKAVRR LGQKARPKLI MEMMDIPNLT QKQIANHLQK  180
YRVQKQEAPH VQPTTYSIVN QSKIMPRTPH PLNTSTLFHS GINMFDQFPD NGHHFNVLNS  240
NEFAVNFNEP LQETYLPQPP ALPSLVSPNP DDYVLTELNG WDDYLVSPEN FNGETIENQI  300
DSYYSSTQDN VPTSKNQNP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129133KRRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774203.10.0PREDICTED: two-component response regulator ARR12-like
TrEMBLA0A1U7W6G30.0A0A1U7W6G3_NICSY; two-component response regulator ARR12-like
STRINGXP_009774203.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA4899714
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-29response regulator 12