PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009774094.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 398aa MW: 44328.5 Da PI: 9.0461 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.9 | 4.7e-33 | 257 | 312 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_009774094.1 257 KQRRCWSPELHRRFVDALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 312 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 13.999 | 254 | 314 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 6.3E-30 | 255 | 316 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.07E-18 | 255 | 315 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.3E-27 | 257 | 312 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.9E-8 | 259 | 310 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence Send to blast |
MGSIPPELSL DCRPTFIPTS ITDFLKQLSS IRNVPDKLFQ IDEYISRLED EMRKIDAFKR 60 ELPLSVLLVK DAIVALRAES VQYKKSRTEP VLEEFIPLKK SSNEDNKAEV TKDKDNSREK 120 MSWMSSVQLW NGDQNTDEAS NKQQSKSELK IRSPEEGNSS VTEDRFQSCK TLNMGKAFSP 180 FKGYSGFSVT TVRKDDKDEL PGVPGLSLHT PGIIKLREET SGLNSKHNGS RGGLSSVASS 240 QSNIRNGSLS QQQAARKQRR CWSPELHRRF VDALQQLGGS QVATPKQIRE LMQVDGLTND 300 EVKSHLQKYR LHTRRIPNTQ TQPANQSGVA LWMSQDQYGG SSKQSSSQSG SPQGPLHLSG 360 SSRGTSTTVG DSMEEEDDVK SESQSWKNHA HMSGKIDV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 8e-14 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 8e-14 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 8e-14 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 8e-14 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009774094.1 | 0.0 | PREDICTED: two-component response regulator-like APRR2 | ||||
Refseq | XP_016443900.1 | 0.0 | PREDICTED: two-component response regulator-like APRR2 | ||||
TrEMBL | A0A1S3XVJ9 | 0.0 | A0A1S3XVJ9_TOBAC; two-component response regulator-like APRR2 | ||||
TrEMBL | A0A1U7WHH6 | 0.0 | A0A1U7WHH6_NICSY; two-component response regulator-like APRR2 | ||||
STRING | XP_009774094.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4361 | 24 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 1e-53 | G2-like family protein |