PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009774081.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 410aa MW: 44862.1 Da PI: 10.0139

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009774081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.5	1.2e-12	332	382	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ e+ ++ XP_009774081.1 332 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEINEELRKKQAEIMEK 382 689***************************************987776654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.9E-11	328	392	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.944	330	382	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.7E-11	332	388	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.3E-12	332	384	No hit	No description
SuperFamily	SSF57959	4.43E-9	332	381	No hit	No description
PROSITE pattern	PS00036	0	335	350	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.18E-22	337	386	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence Send to blast
MGSYLNFKNF ADSPQPESNG GNSMCNGNFP LARQSSIYSL TFDELQTTFS GLGKDFGSMN 60 MEDLLKNIWT AEETQATAST TGGVDGSVAA ENLQRQGSLT LPRTLSQKTV DEVWRDFQKE 120 TVSAKEGSDT GNSNFGQRQS TLGEMTLEEF LVRAGVVRED MQCTNSNGIT FDNGSSQKSN 180 NNGLNIAFQQ PTQNNGLLIN QIAANNMLNV VGATPSQQQP QHQQPLFPKQ TTVAFASPMQ 240 LSNNGHLASP RTRAPVVGMS GSSVNTNMAQ GGVRGMAGFH NGVSPAKGGS PGNDFVARSN 300 TDTSSLSPSP YAFNEGVRGR RSGSSLEKVV ERRRRRMIKN RESAARSRAR KQAYTLELEA 360 EVAKLKEINE ELRKKQAEIM EKQKNQLLEK RNMPCGYKLR CLRRTLTGPW

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence Send to blast

MGSYLNFKNF ADSPQPESNG GNSMCNGNFP LARQSSIYSL TFDELQTTFS GLGKDFGSMN  60
MEDLLKNIWT AEETQATAST TGGVDGSVAA ENLQRQGSLT LPRTLSQKTV DEVWRDFQKE  120
TVSAKEGSDT GNSNFGQRQS TLGEMTLEEF LVRAGVVRED MQCTNSNGIT FDNGSSQKSN  180
NNGLNIAFQQ PTQNNGLLIN QIAANNMLNV VGATPSQQQP QHQQPLFPKQ TTVAFASPMQ  240
LSNNGHLASP RTRAPVVGMS GSSVNTNMAQ GGVRGMAGFH NGVSPAKGGS PGNDFVARSN  300
TDTSSLSPSP YAFNEGVRGR RSGSSLEKVV ERRRRRMIKN RESAARSRAR KQAYTLELEA  360
EVAKLKEINE ELRKKQAEIM EKQKNQLLEK RNMPCGYKLR CLRRTLTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KF442268	0.0	KF442268.1 Solanum nigrum abscisic acid-insensitive 5-like protein mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009774081.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
Swissprot	Q9M7Q4	1e-105	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1U7WA27	0.0	A0A1U7WA27_NICSY; ABSCISIC ACID-INSENSITIVE 5-like protein 7
STRING	XP_009774081.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34000.2	4e-82	abscisic acid responsive elements-binding factor 3

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]