PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009772560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 209aa MW: 24528.2 Da PI: 9.9224 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.1 | 1.8e-49 | 42 | 172 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 pGfrFhPtdee+v +yL++kve+k++++ e ik++diyk++Pwd+p++ + ++kewyfF+ r +ky+++ r+nr+t+sg+Wkatg dk+v+s++ XP_009772560.1 42 LPGFRFHPTDEEVVGFYLRRKVENKRINI-ELIKRIDIYKYDPWDIPRASTIGDKEWYFFCMRGRKYKNSVRPNRVTRSGFWKATGVDKPVYSTT 135 69***************************.89***************877889****************************************84 PP NAM 97 gel.....vglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk Lv+y+g+ kg+ktdW+mhe+rl XP_009772560.1 136 KSQnhdciIGLKKCLVYYRGSVGKGTKTDWMMHEFRL 172 44456777***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.29E-51 | 40 | 177 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 46.477 | 41 | 204 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.7E-26 | 43 | 172 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MHVIESKKNR LKKDQEKSQV MELKDVAVAK TIKDGDEEEV TLPGFRFHPT DEEVVGFYLR 60 RKVENKRINI ELIKRIDIYK YDPWDIPRAS TIGDKEWYFF CMRGRKYKNS VRPNRVTRSG 120 FWKATGVDKP VYSTTKSQNH DCIIGLKKCL VYYRGSVGKG TKTDWMMHEF RLPPTWKTTS 180 NQLPSNHEAV HTPETLLVES LKFEAEIKN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-47 | 33 | 172 | 7 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009772560.1 | 1e-156 | PREDICTED: transcription factor JUNGBRUNNEN 1-like | ||||
Swissprot | Q9SK55 | 2e-78 | NAC42_ARATH; Transcription factor JUNGBRUNNEN 1 | ||||
TrEMBL | A0A1U7WEA5 | 1e-155 | A0A1U7WEA5_NICSY; transcription factor JUNGBRUNNEN 1-like | ||||
STRING | XP_009772560.1 | 1e-155 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1697 | 24 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 9e-81 | NAC domain containing protein 42 |