PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009771234.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 935aa    MW: 106581 Da    PI: 9.6753
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009771234.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.41.1e-10441489254
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     +++GV+ +k +g+++A Irdp     + kr++lg+f  a+e  ka+ a   ++e
  XP_009771234.1 441 QFPGVWKRK-NGKYAAVIRDPI----KkKRVWLGTFSVAQEDSKAYLAKQCEFE 489
                     799**8888.8*********72....35******************99988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.20E-10440481No hitNo description
Gene3DG3DSA:3.30.730.101.3E-11441484IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-8441488IPR016177DNA-binding domain
SMARTSM003808.7E-5441500IPR001471AP2/ERF domain
PROSITE profilePS5103211.97441504IPR001471AP2/ERF domain
PfamPF133596.2E-27715876IPR027806Harbinger transposase-derived nuclease domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 935 aa     Download sequence    Send to blast
MSKFKNKSCK ELGGIEERRV RLGEGSTFIH RIRILLEESM MGWFITNAVF VSARKVIVNM  60
PCLKAQLQRV VLTPSAHSLG EEALVNTSML AKEKTGKVRL TQKTLPHKGI FLIAQGEFNV  120
SMSYSLHNFH VVVLVLATHS TGREAGVGTN MKARSCITLN TTTGINAQML YKCEAIHSLL  180
RSNRDVTNAL WTKTLMYGRN TTAQEKNHAK MVTEDYGRTH ANLYKNELIV DRGSSAFCVW  240
KCKFLHTAGQ NNKVLKGKVQ YTGNETHARL KRKHYKISTH SQEEKSRIDI SLMLARRKFR  300
THLPSHLVQR TGICILAGTY LRLMVNSAFE GKPTDIGNNT KMLETAKHCS TDFGRLQRGD  360
NDIEDASKSK ITMKHISTTS TEVSEQHEKG HFDSAWLIQC KKTQFTQKTN KVAVGTIKRG  420
NFQPFKYHMD SIVFGLHDET QFPGVWKRKN GKYAAVIRDP IKKKRVWLGT FSVAQEDSKA  480
YLAKQCEFEK LNQGKQGGES NNCEQFQPDS SGAELSPLAN EQSLNTADLH CVWMMADRNN  540
QNNRQILEQV SSLATYAACL VAIWFWTYVR EIENDRRTIT HDIRLESEQV RHELLSHLFS  600
TELCRNIIRM TPLAFTDLCE MLVREGDLRP TLQATVEEQV AKTLYLLAHN TTNRELAFIF  660
RRSGESVSRH FHIVLRAILG LYEKFIKQPD GSQVPSEIAS SPRFYPYFKD CIGAIDGTRI  720
RVKVSQREAP RYRGRKDYPT QNVLAACTFD LKFTYVLAGW EGTASDSRIM KEALNRQDPL  780
KLPEGKYYLV DAGLMLRSGL ITPYRGERYH LKEYSRNPPR NPHELFNLRH ASLHNAIERA  840
FGVLKKRFPI ISSSTEPSYG VESQKLIIFS CCILHNYLRV ADPNDELLAQ VDAELMNDNV  900
VHEEPPNPRE SSEEFRKGEL IRDGIAADMW ANYQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1446464KRKNGKYAAVIRDPIKKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771234.10.0PREDICTED: uncharacterized protein LOC104221796
TrEMBLA0A1U7W9A20.0A0A1U7W9A2_NICSY; uncharacterized protein LOC104221796
STRINGXP_009771234.10.0(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-12ERF family protein