PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009770806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 160aa MW: 18473.7 Da PI: 6.6647 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.2 | 2.7e-09 | 3 | 60 | 72 | 128 |
NAM 72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyrl 128 +r +r+ ++g+Wk + +++++kg++ g ++ + f + r+++ge + +W+m+ey++ XP_009770806.1 3 TRVRRTCANGTWKGQTGIDPIKNAKGTVAGFRRCFKFQTSRSKEGEhNKNWLMKEYSV 60 7899999******8888899***9**************999999874789******86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.67 | 1 | 83 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.85E-14 | 3 | 82 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-5 | 6 | 60 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
EHTRVRRTCA NGTWKGQTGI DPIKNAKGTV AGFRRCFKFQ TSRSKEGEHN KNWLMKEYSV 60 GNDFFRENNI PKEDIVVCRI KKNIRSKKNH GVNMEEQDVP KAIEAMLHGP DEDYCTTVQP 120 ATICQAADQH QVNDWSNYQQ EVNWADDMLI GIDEFGDIIW |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753260 | 0.0 | EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009770806.1 | 1e-119 | PREDICTED: NAC domain-containing protein 55-like, partial | ||||
TrEMBL | A0A1U7W0T1 | 1e-117 | A0A1U7W0T1_NICSY; NAC domain-containing protein 55-like | ||||
TrEMBL | B3VK72 | 1e-116 | B3VK72_TOBAC; NAC transcription factor | ||||
STRING | XP_009770806.1 | 1e-118 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04060.1 | 2e-07 | NAC domain containing protein 46 |