PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009769770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 306aa MW: 35652.9 Da PI: 5.2635 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 153.4 | 1e-47 | 35 | 160 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppG+rF P+d+el+v+yLkkkv +++l+ + ikev+++ + P++L + +ekewyfF++rdkky++g+r+nra+ +gyWkatg dk++ + XP_009769770.1 35 PPGYRFCPRDDELIVHYLKKKVMNEPLPS-NEIKEVNLCMHSPQQLSeTYPVVGEKEWYFFTPRDKKYKNGTRPNRAAGTGYWKATGADKPINH- 127 9***************************9.67**************8334445899**************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+ vg +k Lv+y+g+ +kg+kt+W+mheyr+ XP_009769770.1 128 NGAIVGFRKALVYYQGEPQKGKKTNWIMHEYRV 160 999****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.31E-55 | 30 | 186 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.761 | 34 | 186 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.2E-26 | 35 | 160 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
MESDRQIQAN FKSSCNTSFC VRVLQVDDYD SLAFPPGYRF CPRDDELIVH YLKKKVMNEP 60 LPSNEIKEVN LCMHSPQQLS ETYPVVGEKE WYFFTPRDKK YKNGTRPNRA AGTGYWKATG 120 ADKPINHNGA IVGFRKALVY YQGEPQKGKK TNWIMHEYRV NESRVEKKDG NTWRLDSWVL 180 CRIYQKVDKS LKTIRRELNS PLSINDHVGM DCDYEGTTDS IGTDNTFEEN VQLLDIAYNS 240 SDIPVDSSIK KFAKLNVDYG YPFQGDEANF NMAQENFTWS YFTYDYMNDV QWDFPSWQEN 300 SLLPLD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-52 | 23 | 192 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-52 | 23 | 192 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-52 | 23 | 192 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-52 | 23 | 192 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-52 | 23 | 192 | 9 | 174 | NAC domain-containing protein 19 |
3swm_B | 7e-52 | 23 | 192 | 9 | 174 | NAC domain-containing protein 19 |
3swm_C | 7e-52 | 23 | 192 | 9 | 174 | NAC domain-containing protein 19 |
3swm_D | 7e-52 | 23 | 192 | 9 | 174 | NAC domain-containing protein 19 |
3swp_A | 7e-52 | 23 | 192 | 9 | 174 | NAC domain-containing protein 19 |
3swp_B | 7e-52 | 23 | 192 | 9 | 174 | NAC domain-containing protein 19 |
3swp_C | 7e-52 | 23 | 192 | 9 | 174 | NAC domain-containing protein 19 |
3swp_D | 7e-52 | 23 | 192 | 9 | 174 | NAC domain-containing protein 19 |
4dul_A | 7e-52 | 23 | 192 | 6 | 171 | NAC domain-containing protein 19 |
4dul_B | 7e-52 | 23 | 192 | 6 | 171 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that positively regulates age-dependent senescence, dark-induced leaf senescence and stress-induced senescence. Regulates leaf senescence through the modulation of the expression of senescence-associated genes SGR1/NYE1, SAG113 and SAUR36/SAG201, which are involved in chlorophyll degradation, and abscisic acid (ABA) and auxin promotion of senescence, respectively. Promotes reactive oxygen species (ROS) production during age-dependent and stress-induced senescence. Regulates positively auxin-mediated responses in roots (PubMed:27388337). Stress-responsive NAC transcription factor involved in ABA-inducible leaf senescence signaling (PubMed:26518251). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:26518251, ECO:0000269|PubMed:27388337}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA) (PubMed:26518251). Induced by salinity and osmotic stress, and during leaf senescence (PubMed:27388337). {ECO:0000269|PubMed:26518251, ECO:0000269|PubMed:27388337}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009769770.1 | 0.0 | PREDICTED: NAC domain-containing protein 67-like | ||||
Swissprot | Q9CAR0 | 1e-56 | NAC32_ARATH; NAC transcription factor 32 | ||||
TrEMBL | A0A1U7W677 | 0.0 | A0A1U7W677_NICSY; NAC domain-containing protein 67-like | ||||
STRING | XP_009769770.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA746 | 24 | 103 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 6e-59 | NAC domain containing protein 32 |