PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009769005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 227aa MW: 26342.4 Da PI: 9.6636 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 90.6 | 2.6e-28 | 31 | 151 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 GfrFhPtd elv +yL + v + +l++ i e d+y+ ePw k + +e+ +yfF++ +kk+ +++r r++ +g Wk++ k k+v+s+kg XP_009769005.1 31 EGFRFHPTDAELV-KYLLQYVLKGRLPELVPIVEEDLYSKEPWVVFK--DRKERTLYFFTELKKKKIENSRFIRSVGKGSWKSQDKGKPVCSEKG 122 7************.89999999999888777*************962..3467899*************************************** PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g k++L + + +p+ +W+m+ey+l XP_009769005.1 123 SVMGYKRSLRYQNLGSPQ--DGQWLMKEYSL 151 ***********9655555..89*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 31.155 | 29 | 179 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.75E-28 | 30 | 179 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-17 | 31 | 151 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MSQLACTSQI IMHNIKNEEK ELCIENSANT EGFRFHPTDA ELVKYLLQYV LKGRLPELVP 60 IVEEDLYSKE PWVVFKDRKE RTLYFFTELK KKKIENSRFI RSVGKGSWKS QDKGKPVCSE 120 KGSVMGYKRS LRYQNLGSPQ DGQWLMKEYS LADEVKKILH QRSRGYDKDN YVVCRVKRKV 180 AKDDPIARKE SIEAAELEAI INPTDGSTKF PNLSIDDVAK LKIMRMQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-19 | 12 | 179 | 3 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009769005.1 | 1e-169 | PREDICTED: NAC domain-containing protein 68-like | ||||
Refseq | XP_016441925.1 | 1e-169 | PREDICTED: NAC domain-containing protein 68-like | ||||
TrEMBL | A0A1S3XPQ2 | 1e-167 | A0A1S3XPQ2_TOBAC; NAC domain-containing protein 68-like | ||||
TrEMBL | A0A1U7W415 | 1e-167 | A0A1U7W415_NICSY; NAC domain-containing protein 68-like | ||||
STRING | XP_009769005.1 | 1e-168 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 7e-21 | NAC domain containing protein 96 |