PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009767632.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ARR-B | ||||||||
Protein Properties | Length: 505aa MW: 56530.9 Da PI: 6.834 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 81.9 | 7.1e-26 | 190 | 243 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ eLHe+F++av+qL G ++A+Pk+ilelm+v+ L +ehv+SHLQkYRl XP_009767632.1 190 KARVLWSAELHEKFLQAVNQL-GMDRAVPKKILELMNVPWLKREHVASHLQKYRL 243 689******************.********************************7 PP | |||||||
2 | Response_reg | 81.6 | 2.4e-27 | 11 | 119 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l+vdD+p+ +++l+++l+k +y ev+++ +e al ll+e++ ++l++ D+ mp+mdG++ll++i e +lp+i+++a ++++ + + + G XP_009767632.1 11 LLVVDDDPTCLKILENMLKKCHY-EVTTCNRAEVALSLLRENKneFHLVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDSKNVVMKGVIHG 103 599********************.***************888889**********************6654.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+l Kp+ +e+l + XP_009767632.1 104 AHDYLIKPVRIEALKN 119 ************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 1.2E-34 | 7 | 127 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 5.0E-41 | 8 | 132 | No hit | No description |
SMART | SM00448 | 8.2E-31 | 9 | 121 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 41.876 | 10 | 125 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 3.72E-29 | 12 | 124 | No hit | No description |
Pfam | PF00072 | 3.4E-24 | 12 | 119 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS51294 | 9.13 | 187 | 246 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.33E-18 | 188 | 247 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.4E-27 | 189 | 247 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.6E-23 | 190 | 243 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.0E-8 | 194 | 242 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence Send to blast |
MSSIKFPTLR LLVVDDDPTC LKILENMLKK CHYEVTTCNR AEVALSLLRE NKNEFHLVIS 60 DVHMPDMDGF KLLEHIGLEM DLPVIMMSAD DSKNVVMKGV IHGAHDYLIK PVRIEALKNI 120 WQHVVRKNKD EWKGKVFDQS ESVEDGEWPQ EPPEDVEHSS SANEGNLKRS KKRKEEDETE 180 ERDDMVALKK ARVLWSAELH EKFLQAVNQL GMDRAVPKKI LELMNVPWLK REHVASHLQK 240 YRLLLKKSMG VPQHPSGLNY SFIGHSEATF GTPLNGQLPA QSLATLWGAA LGQSATKSSL 300 HVPLVDQGNH FSFENPKLRF QTQQQLNNSN KQVNLLYGIP TTVEPKQSLR NGIVDNARGD 360 IYNQASQAYS AVDFSLNQNM QLRGSSFPAS GNSAMSTLAT KGMLKEEVNT DIRGSRGFSP 420 NDDSFSGLYQ QTKQDWCLQN VGSTFDTSYH SSIQHRISSM DKSGQNTNAP IAEAVLSSGQ 480 ETGHVNLMGG SQLNSLLEAT KHWTS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 1e-19 | 187 | 247 | 2 | 62 | ARR10-B |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins. Involved in the expression of nuclear genes for components of mitochondrial complex I. Promotes cytokinin-mediated leaf longevity. Involved in the ethylene signaling pathway in an ETR1-dependent manner and in the cytokinin signaling pathway. {ECO:0000269|PubMed:11370868, ECO:0000269|PubMed:11574878, ECO:0000269|PubMed:15282545, ECO:0000269|PubMed:16407152}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009767632.1 | 0.0 | PREDICTED: two-component response regulator ARR2-like isoform X3 | ||||
Swissprot | Q9ZWJ9 | 1e-131 | ARR2_ARATH; Two-component response regulator ARR2 | ||||
TrEMBL | A0A1U7VHS7 | 0.0 | A0A1U7VHS7_NICSY; Two-component response regulator | ||||
STRING | XP_009767630.1 | 0.0 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-123 | response regulator 2 |