PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009767422.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 286aa    MW: 32796.9 Da    PI: 7.3404
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009767422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.41.1e-22141473128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      GfrF+Ptdeel+ +yL k v+ k++++ ++i+  ++y k +P+d+  +++ ++++++ yfF+k ++++a g+r +r  +  g Wk   k+k+v+
  XP_009767422.1  14 LGFRFRPTDEELI-RYLLKFVSCKSFSF-DHIRVENLYgKKKPSDIFeNNFLGDDTKVnYFFTKLKRTKAGGSRFSRgLIGGGCWKGLDKHKPVF 106
                     6************.9***********99.8899999983569****6455555555545******************999*************** PP

             NAM  94 skkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                     + +++lvg kk++ +        k  +++ ++  W m+ey+l
  XP_009767422.1 107 K-GSKLVGFKKSFRYLekdsrteKSVDQEIKNIVWNMKEYSL 147
                     9.9*************554443323344455788******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.51212174IPR003441NAC domain
SuperFamilySSF1019413.14E-2412174IPR003441NAC domain
PfamPF023651.9E-1315147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MTISSHNYGP YPVLGFRFRP TDEELIRYLL KFVSCKSFSF DHIRVENLYG KKKPSDIFEN  60
NFLGDDTKVN YFFTKLKRTK AGGSRFSRGL IGGGCWKGLD KHKPVFKGSK LVGFKKSFRY  120
LEKDSRTEKS VDQEIKNIVW NMKEYSLNDS ILKVLRQRNI IQHEDYVLCC IKRKSVHAND  180
HKELGDHMEI ADSGNNVVDV MNTMLSTTQE HELDYVTSSS EDQGIGFHDL CPSNQFASSE  240
HNNAFDQLQL VDVQAQNIEE IAPSVQSHVE YVGSSSTTSN QFTYYL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767422.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1U7VH590.0A0A1U7VH59_NICSY; NAC domain-containing protein 78-like
STRINGXP_009767422.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.19e-21NAC domain containing protein 2