PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009767276.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 340aa MW: 37988.2 Da PI: 4.3422 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.4 | 7.6e-18 | 109 | 158 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 s+ykGVr++k +g+W+AeI+d + + +r++lg++ ta+eA +a++ r+++e XP_009767276.1 109 SKYKGVRQRK-WGKWAAEICDpF-----KgRRVWLGTYSTAKEASRAYELKRLEFE 158 89*******9.**********55.....45**********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 9.8E-13 | 109 | 159 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.60E-22 | 109 | 166 | No hit | No description |
SuperFamily | SSF54171 | 1.7E-16 | 109 | 158 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 19.203 | 110 | 168 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.0E-18 | 110 | 174 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-20 | 110 | 159 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-9 | 111 | 122 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-9 | 133 | 149 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence Send to blast |
MFEPERLFSS DLENLKRNMK EKADTDRKMR KIRIVCYDPD ATDSSDDEGI NYPKSKHFVR 60 EIKLQIGNSF STPKTSETEC SFQDSNNGEK KPKNKALAKP LIQPRQGLSK YKGVRQRKWG 120 KWAAEICDPF KGRRVWLGTY STAKEASRAY ELKRLEFERM TKNSTNVSEK SSDDQNQTNT 180 NVASVSEDSA ESSASHTSHS LPSSVLELDS LTSASASTPI SGHNDNEKAS NVALEANVLE 240 QEVPELALME ETLSLAQIGE TMDLELDLEL ALMISVSILD EFVIDDFEDP PVCVIEGDDQ 300 LPPGLPDFDF DFDFDGYDES FGLMDDVPRM NGTALNIACP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009767276.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A1U7VQQ6 | 0.0 | A0A1U7VQQ6_NICSY; ethylene-responsive transcription factor ERF118-like | ||||
STRING | XP_009767276.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2957 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 3e-22 | ERF family protein |