PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009767038.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 185aa    MW: 20544.1 Da    PI: 5.3108
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009767038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.6e-182373156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    s y+G+r  k++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g+
  XP_009767038.1 23 SVYRGIR--KRNGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKGH 73
                    78****6..779*********843...5*************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.62E-152380No hitNo description
PfamPF008473.4E-112373IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-182381IPR016177DNA-binding domain
PROSITE profilePS5103220.3892480IPR001471AP2/ERF domain
SMARTSM003808.7E-262486IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-262480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MWSNHCPSNS AAISNRSEQG RHSVYRGIRK RNGKWVSEIR EPRKTTRIWL GTYPTPEMAA  60
AAYDVAALAL KGHDTPLNFP GSMCSYTMPA SLTAADIRAA AANAAAVRAP QLEREEARHQ  120
AECQPEVGDG AMGQEFFDEE EVFGMPRLLV DMAEAMLVSP PRMKTTPYDE LPEYSDASYT  180
LWSYP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1222921281Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767038.11e-137PREDICTED: ethylene-responsive transcription factor ERF025-like
RefseqXP_009767039.11e-137PREDICTED: ethylene-responsive transcription factor ERF025-like
SwissprotQ9FJ905e-49ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A1U7VXD81e-136A0A1U7VXD8_NICSY; ethylene-responsive transcription factor ERF025-like
STRINGXP_009767038.11e-136(Nicotiana sylvestris)
STRINGXP_009767039.11e-136(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-40ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]