PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009766251.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WOX
Protein Properties Length: 185aa    MW: 21261.8 Da    PI: 9.619
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009766251.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.28.7e-16564357
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    +R+++t+eql +L+e+++k   +p+a++ ++ +++l    +++++  ++WFqN++a+ekk
  XP_009766251.1  5 TRWSPTPEQLMTLQEMYRKgLTNPNAAQLQRVTDHLslfgKIETKFFFYWFQNHKAREKK 64
                    8*****************99***************************************8 PP

2Wus_type_Homeobox941.4e-30465364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +tRW+PtpeQ++ L+e+y++Gl +Pn++++qr+t +L+ +Gkie k  fyWFQN+kaRe++k
     XP_009766251.1  4 HTRWSPTPEQLMTLQEMYRKGLTNPNAAQLQRVTDHLSLFGKIETKFFFYWFQNHKAREKKK 65
                       69**********************************************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.345165IPR001356Homeobox domain
SMARTSM003897.6E-4269IPR001356Homeobox domain
SuperFamilySSF466897.45E-8471IPR009057Homeodomain-like
PfamPF000462.4E-13564IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.605.6E-5665IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MTGHTRWSPT PEQLMTLQEM YRKGLTNPNA AQLQRVTDHL SLFGKIETKF FFYWFQNHKA  60
REKKKLKKKL LMQMNQQQQM SMNNDLDCSN NLPLFTSSAR LMAEVEDAST RLMNSLRNMN  120
PPIPTKCDME TCMMRAQGPH FILMMDIVPN PTSLPCISSN TPLKTLELFP VTSSSSLKDL  180
AKEIS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16169EKKKLKKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009766251.11e-136PREDICTED: WUSCHEL-related homeobox 3-like
TrEMBLA0A1U7VMR21e-135A0A1U7VMR2_NICSY; WUSCHEL-related homeobox 3-like
TrEMBLA0A2S1B7G41e-135A0A2S1B7G4_TOBAC; WOX3d
STRINGXP_009766251.11e-135(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29591951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.19e-26WOX family protein