PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009766098.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 304aa MW: 33562.3 Da PI: 6.3123

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009766098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.5	2.2e-11	175	220	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ XP_009766098.1 175 KRIKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 220 899**********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.3E-14	171	235	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.703	173	225	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.6E-10	175	220	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.6E-14	175	226	No hit	No description
SuperFamily	SSF57959	1.55E-11	175	229	No hit	No description
CDD	cd14703	2.51E-23	176	226	No hit	No description
PROSITE pattern	PS00036	0	178	193	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence Send to blast
MAQLPPKVPT MAHNWPFQTM PPLHNNNINN NSWVDDFLDF SSARRNSHRR SVSDPIAFVE 60 AAPFLQQCHG GANSSIGFDK LDDEQLTTMF SDDSGGAAAF AVTTAPSSNP SSTNPSTPSD 120 QISENEDQKF VPQVDVNQVI QPKNEPGEVD SSCDTQPPPP PASDSSDNNP IVDPKRIKRI 180 LANRQSAQRS RVRKLQYISE LERSVTSLQT EVSALSPRVA FLDHQRLLLN VDNSALRQRI 240 AALAQDKIFK DAHQEALKKE IERLRQIYHE QNMKKMGNNG TAHAPPSAAA PPSTFNKMSC 300 TEEA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975519	4e-42	HG975519.1 Solanum lycopersicum chromosome ch07, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009766098.1	0.0	PREDICTED: basic leucine zipper 61-like
Refseq	XP_016452782.1	0.0	PREDICTED: basic leucine zipper 61-like
Swissprot	Q9M2K4	7e-95	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A1S3YLD9	0.0	A0A1S3YLD9_TOBAC; basic leucine zipper 61-like
TrEMBL	A0A1U7VIC5	0.0	A0A1U7VIC5_NICSY; basic leucine zipper 61-like
STRING	XP_009766098.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1775	24	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	2e-81	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]