PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009765647.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 324aa    MW: 36844.7 Da    PI: 8.4988
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009765647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.72.4e-081832241556
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                      +A rsR RK++ i+eLe+ v++L+ae ++L  ele l ++ 
  XP_009765647.1 183 QSAHRSRVRKLQHIAELERTVQALQAEGSELSAELEFLDQQN 224
                     69**********************************998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147032.90E-13174225No hitNo description
SMARTSM003385.8E-6174233IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.28E-7183227No hitNo description
Gene3DG3DSA:1.20.5.1706.5E-9183227No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MHPSFEISLE MESSNGSSRL KNFSFSNKQL IMDSTSEGSG SGSSHHHRCN SESFLIEEQP  60
SWLDDLLNEP AETLVVHKGH RRSASDTFAY LGAAAERLNT REINNNVNVG GSSINYVSYK  120
DHLTSSVSYD TKPTSAKAAL ELNEKHNREV ISTQNKEGSS ERSNNTQAKH SMSKADAKRA  180
KQQSAHRSRV RKLQHIAELE RTVQALQAEG SELSAELEFL DQQNIILSME NRALRQRLDS  240
LSQEQLIKHL EQEMLERELT RLQTLYQMQR QQMQQQQHQQ PQQQNHSKHR RNKSRDLEAQ  300
IANLSIKNNE ASSSRVQVTG SVRM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754508e-84HG975450.1 Solanum pennellii chromosome ch11, complete genome.
GenBankHG9755238e-84HG975523.1 Solanum lycopersicum chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009765647.10.0PREDICTED: uncharacterized protein At4g06598-like isoform X1
TrEMBLA0A1U7VC990.0A0A1U7VC99_NICSY; uncharacterized protein At4g06598-like isoform X1
STRINGXP_009765647.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114452023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.22e-39bZIP family protein