PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009762991.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 335aa MW: 38759.9 Da PI: 4.3355 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 81.1 | 2.3e-25 | 12 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 p+G rFhPtd e++ +yL v++++l+ ++ ++ +d+y ePw++ + + +++++ yf ++++k+++t kr +r++ +g+Wk +gk +e XP_009762991.1 12 PMGHRFHPTDREVL-KYLIGFVRDEPLHSQNElMQVADLYADkEPWQIFEaydQGNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKPQGKGRE 105 89**********99.9**********88766647777*997559****74232333344467********************************* PP NAM 92 vlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 v++ kg+l+g k+L + +++++ ++ +W+m ey+l XP_009762991.1 106 VFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 143 ******************656888889*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-28 | 8 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 28.509 | 11 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.9E-13 | 12 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence Send to blast |
MEYSQAKCFS RPMGHRFHPT DREVLKYLIG FVRDEPLHSQ NELMQVADLY ADKEPWQIFE 60 AYDQGNNNNN TRYFITPQKK EKPTWKRVSR TVGKGTWKPQ GKGREVFDDK GRLMGYVKSL 120 KYIPANKSSN NVNGEWLMTE YSLFDRYLAA REIKNKGFVI CKIKKKGKPG DKKKGNNIDE 180 VVNDENMRDI EEFINTVLQE DVQVEDNGIR SNGTIAKLDD QENNIIQYVE GDQVRDHVLG 240 LLDSTEDIVD VNDHEEYVED CVDEGDEVQV HLLEEYIDSV LQSEDVQAED NGMMSSNDII 300 AKDDEENMEY QVEDNQHATF WASAEDVDLD TINFC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009762991.1 | 0.0 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1U7VDH3 | 0.0 | A0A1U7VDH3_NICSY; NAC domain-containing protein 78-like | ||||
STRING | XP_009762991.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36160.1 | 8e-16 | NAC domain containing protein 76 |