PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009761286.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 311aa    MW: 35798.3 Da    PI: 4.9665
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009761286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.52.5e-2371331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+GfrFhPtd el+ ++Lk+ v++  l+ +  i+ ++i  +ePw++    +++ek  yf sk ++ +++ k+ +r++ +g+Wk +    ++++ 
  XP_009761286.1   7 LPMGFRFHPTDVELI-NFLKRYVHRGILPPDGDIEVAKIGVTEPWQIFGDSNSKEKTRYFVSKLKRFKNSTKKFSRTVGRGTWKDQSGGAPIKHG 100
                     799************.9**********999888**************87778888999**********99**********************996 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k+  vg +++L +   +  k ++ +W+m+ey l
  XP_009761286.1 101 sKNIIVGFRRSLKYK-SNIVKEQNDKWLMKEYIL 133
                     455569*******98.56666689********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-254154IPR003441NAC domain
PROSITE profilePS5100526.3487154IPR003441NAC domain
PfamPF023651.4E-158132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MLPKAKLPMG FRFHPTDVEL INFLKRYVHR GILPPDGDIE VAKIGVTEPW QIFGDSNSKE  60
KTRYFVSKLK RFKNSTKKFS RTVGRGTWKD QSGGAPIKHG SKNIIVGFRR SLKYKSNIVK  120
EQNDKWLMKE YILAEDYFKE SNEDIIVLCK IKDKKMNEKK VDGNEIMEEE VDELVTSLSG  180
SNEEKTWNWE GDSSGALTVP ITDTGEQVEY IEVLERNHHQ VTNNDMNQLA LVNDVYDVMH  240
TNEANTLITG TFENQGFEAY GQEQANYLAA GVEQNIDYQY ADYSNDWFLS MINFEVLPEQ  300
DLGMQIDKPI K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009761286.10.0PREDICTED: NAC domain-containing protein 2-like
RefseqXP_016436667.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A1S3X9T10.0A0A1S3X9T1_TOBAC; NAC domain-containing protein 41-like
TrEMBLA0A1U7V8K20.0A0A1U7V8K2_NICSY; NAC domain-containing protein 2-like
STRINGXP_009761286.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1523178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.19e-16NAC domain containing protein 2