PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009761171.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 527aa    MW: 58634.6 Da    PI: 4.1465
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009761171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.62.4e-07263309346
                      SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqk 46 
                      +W++eE+el+ ++v   +       W+  a +++  R++++++s++++
   XP_009761171.1 263 KWSEEEEELFHEVVLSNPASvgknFWNHLAIEFP-SRSREELVSYYFN 309
                      8*************9988778888**********.***********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.0017260313IPR001005SANT/Myb domain
PfamPF002495.4E-6263309IPR001005SANT/Myb domain
CDDcd001670.00719263309No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MVQKRSYGEE ELYEVSSKQP RHEPSCQIVS VLELSRESVA VKAYASVGGD EENSSSINPD  60
ADNELDSHNV AEALFSSGKE TDMCIYGSAS NSSWPTSCTS EEDIRPEAPF HILMSPEYYY  120
FDHPFRGAAH HGEMYSSLLS DPPQKMVPIG PDFQAELPEW GAFVNQDKPY MEGMCETMCP  180
SSQAYENKLA GTSIIPMPAM ELCADNGENI VERGGECSCE DIGSIRCVRL HIMEAREKLK  240
LALGEETFFR LGFCDMGEVV AEKWSEEEEE LFHEVVLSNP ASVGKNFWNH LAIEFPSRSR  300
EELVSYYFNA FILRKRAEQN RLDPLHIDSD NDEWLEIVGD AAQEANMTDE DEESVVESPA  360
YHNDLIGNGI HEELDKHDED GGDATWEDYK ALNFGSRKVF TDVPESCPGE LFDSNSSYKL  420
SLQPQDQGLS NKVVKQEVQD GSCTTVAAGV TSESSLGQTN NGKRWANDIT GMGSGIEHDR  480
VLGPCGGKEW DVGYLSCARN EVDLLPTRTM IEEVFGDGAW IYKSRDG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009761171.10.0PREDICTED: uncharacterized protein LOC104213369 isoform X1
TrEMBLA0A1U7V8920.0A0A1U7V892_NICSY; uncharacterized protein LOC104213369 isoform X1
STRINGXP_009761171.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15141625