PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009760821.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 418aa MW: 46638.4 Da PI: 5.0327 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.1 | 2.6e-51 | 27 | 155 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptdeelv++yL+ k++g + ++ vi+evdi+k+eP+dLp + v++++++w+fF++ d+ky++g+r nrat++gyWkatgkd++++ XP_009760821.1 27 LPVGYRFRPTDEELVNHYLRLKINGCHDKV-AVIREVDICKFEPSDLPdlSVVESKDNDWFFFCPIDRKYQNGQRLNRATEQGYWKATGKDRNIV 120 799************************999.89**************96448888999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 +kkg+++g+kktLv+y grap+g++t+Wv+heyr+ XP_009760821.1 121 TKKGAKIGMKKTLVYYIGRAPEGKRTNWVIHEYRA 155 *********************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.28E-57 | 24 | 178 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.085 | 27 | 178 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-26 | 28 | 154 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence Send to blast |
MAVIAGDNSI AGLPVGKHLG VPPLNTLPVG YRFRPTDEEL VNHYLRLKIN GCHDKVAVIR 60 EVDICKFEPS DLPDLSVVES KDNDWFFFCP IDRKYQNGQR LNRATEQGYW KATGKDRNIV 120 TKKGAKIGMK KTLVYYIGRA PEGKRTNWVI HEYRATDKSL DGSHTGQGAF VLCRLFKKNE 180 LKQDENVESS HLDEVQQLVS SPAVGKSPDD EISDAVAPSP IMESDSDKRN PPKISGGETH 240 GTRLPIESRG DSCTVDDTED QMLDITSVPS DPELEKLLEI FCDTSPQHLD WKICSPLHAQ 300 LQVEFGSSYL HAPVINEMSH DQKDVQFQNG TNAFDINEFF NSVLDSSDEL SYEDSGLELR 360 TVQFASNSIN TITRSPVKDF GLCSESKAQV MQEPVSGALL GQIFLNPRCC GEILRRLH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-45 | 16 | 183 | 1 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-45 | 16 | 183 | 1 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-45 | 16 | 183 | 1 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-45 | 16 | 183 | 1 | 170 | NO APICAL MERISTEM PROTEIN |
4dul_A | 3e-45 | 16 | 183 | 1 | 170 | NAC domain-containing protein 19 |
4dul_B | 3e-45 | 16 | 183 | 1 | 170 | NAC domain-containing protein 19 |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009760821.1 | 0.0 | PREDICTED: NAC domain-containing protein 74-like isoform X2 | ||||
TrEMBL | A0A1U7V769 | 0.0 | A0A1U7V769_NICSY; NAC domain-containing protein 74-like isoform X2 | ||||
STRING | XP_009760820.1 | 0.0 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49530.1 | 5e-83 | NAC domain containing protein 62 |