PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009760677.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 255aa    MW: 29537.5 Da    PI: 6.4003
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009760677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.51.8e-21131413128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     +G+rFhPt+ el+ ++Lk+ ++g+ l+ e   ++ +diy    Pw++  +  + +eek  y F++ +k++++ +r +r  ++g+Wk +    +++
  XP_009760677.1  13 MGVRFHPTEAELI-NFLKRFLKGELLPSECPnFQLADIYGDqPPWEIFgAsDHPEEEKVRYIFTRLKKQKSEHTRVRRNCANGTWKGQTGIFPIK 106
                     7************.9*********977755459999***87368***7322333455566**************************88888**** PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + kg++vg ++ + f + ++++ ++  W+m+ey++
  XP_009760677.1 107 NGKGTVVGFRRCFKFQTSSKEREHNKIWLMKEYSV 141
                     *9**************9999999**********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.45E-262163IPR003441NAC domain
PROSITE profilePS5100525.80811164IPR003441NAC domain
PfamPF023653.8E-1413141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MSMVPAARSG CIMGVRFHPT EAELINFLKR FLKGELLPSE CPNFQLADIY GDQPPWEIFG  60
ASDHPEEEKV RYIFTRLKKQ KSEHTRVRRN CANGTWKGQT GIFPIKNGKG TVVGFRRCFK  120
FQTSSKEREH NKIWLMKEYS VGDDFFKENN IPKEDIVVCR IKKNIRAEKN HGVTMEEQDV  180
PKVIEAMLHG PDEVYGTTIL QPATTCQAAE HQVMDETQKM NEQNNNNNDC SYYQQETNWA  240
DDLLIRIDDF GDIIW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009760677.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1U7UXB30.0A0A1U7UXB3_NICSY; NAC domain-containing protein 78-like
STRINGXP_009760677.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-16NAC domain containing protein 2