PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009758709.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 387aa    MW: 43370.3 Da    PI: 4.9293
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009758709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.52e-132911821128
             NAM  21 kkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk 115
                     +   g++++  +vi + ++y+++P++Lp+        w+  s+++kk          tk g+W+a+g++ e+++ +++  g ++t+ f +++ap 
  XP_009758709.1  29 QINCGSPIPD-DVIVD-NLYQYDPSNLPA------GAWFLVSSNEKK---------ETKYGFWRAKGESCEIFA-NSAIYGWRTTFEFVEAQAPI 105
                     5555555555.55544.899999999991......245555444443.........4789**************.999***************** PP

             NAM 116 gektdWvmheyrl 128
                     g+kt W+m+ey++
  XP_009758709.1 106 GQKTVWMMQEYKI 118
                     ***********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.0659140IPR003441NAC domain
SuperFamilySSF1019415.23E-1917138IPR003441NAC domain
PfamPF023652.1E-649118IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MCPLALAAPP PGLIGSCWSD DQIIFSLDQI NCGSPIPDDV IVDNLYQYDP SNLPAGAWFL  60
VSSNEKKETK YGFWRAKGES CEIFANSAIY GWRTTFEFVE AQAPIGQKTV WMMQEYKITL  120
KEQHDHTKSK ESALCRVFSC SDENLNNERK PENINKVNNE TKPEHRNDDL DTLLLSLMPS  180
ITPHTSSNDG QHSIGEPQVK NQTEGIRPDH FDDDIVAELD CILREDYLEL NDLVGVASHS  240
SSSVNSSRQS LASDEYFDSM AFLRDLDDEK NQDLHGKGST SNYRIMMCRR ANDVVMPPAP  300
LESYISGSAA AAKYTQPGPS NKAEFPSKSS PEQDIKRLKA ECTNDEGPSH SYRATASFSS  360
SSSHEPVTTR EEKRKKKLKK FLCFMPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009758709.10.0PREDICTED: NAC domain-containing protein 19-like
RefseqXP_016452711.10.0PREDICTED: NAC domain-containing protein 19-like
TrEMBLA0A1S3YKE00.0A0A1S3YKE0_TOBAC; NAC domain-containing protein 19-like
TrEMBLA0A1U7V8W20.0A0A1U7V8W2_NICSY; NAC domain-containing protein 19-like
STRINGXP_009758709.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112072123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.14e-13NAC domain containing protein 58