PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009757158.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 239aa MW: 27403.3 Da PI: 9.3586 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 140.9 | 7.7e-44 | 9 | 135 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt eel+++yLk ++g+kl+ +vi+ v+iy ++Pw+Lp ++ +e+ewyfF++ ++k+ + ++nr+t++g+Wkatg+d ++ s+ XP_009757158.1 9 PGFRFHPTAEELINFYLKSIIKGNKLDS-NVIAFVNIYLHDPWELPGLARIGEREWYFFVPINRKHGPKGKPNRTTRNGFWKATGSDCQIRSTld 102 9*************************99.99***************8778899**************************************9988 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++glkktLvfy grapkg +tdWvm+eyrl XP_009757158.1 103 PRKVIGLKKTLVFYGGRAPKGCRTDWVMNEYRL 135 8889***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 49.916 | 7 | 155 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.81E-52 | 8 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-23 | 9 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MSLPELELPG FRFHPTAEEL INFYLKSIIK GNKLDSNVIA FVNIYLHDPW ELPGLARIGE 60 REWYFFVPIN RKHGPKGKPN RTTRNGFWKA TGSDCQIRST LDPRKVIGLK KTLVFYGGRA 120 PKGCRTDWVM NEYRLPDGHP LPKDHDIVLC KVYRKATSFK VLEQRAIVEE HAAKRPPTSH 180 DNLGPLVPQE DLESSASHNF RSFQEENHNT TIKLPQLSSP LWTELQSTGQ DLWSLFSLS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-41 | 5 | 160 | 12 | 173 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975441 | 2e-77 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. | |||
GenBank | HG975514 | 2e-77 | HG975514.1 Solanum lycopersicum chromosome ch02, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009757158.1 | 1e-179 | PREDICTED: putative NAC domain-containing protein 94 | ||||
Swissprot | Q10S65 | 3e-76 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A1U7USG2 | 1e-178 | A0A1U7USG2_NICSY; putative NAC domain-containing protein 94 | ||||
STRING | XP_009757158.1 | 1e-179 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-84 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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